Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RPS27AP11-201ENST00000402798 447 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AL513331.1-201ENST00000411908 397 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 HMGB3P2-201ENST00000411913 584 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 IPO7P1-201ENST00000442031 636 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AL133162.1-201ENST00000463228 453 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 RPS12P20-201ENST00000464109 380 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 RN7SL323P-201ENST00000494712 295 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 ACTR3BP4-201ENST00000503033 1244 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 PRELID3BP6-201ENST00000503839 571 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 IGKV2-36-201ENST00000519999 223 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AP004607.5-201ENST00000532034 217 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 CYCSP30-201ENST00000546447 172 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC120057.2-201ENST00000571520 271 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 RPS3AP23-202ENST00000574601 686 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 RPS15AP11-201ENST00000594193 385 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AL136363.1-201ENST00000605349 337 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AL031601.2-202ENST00000622650 282 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AC010435.1-201ENST00000623353 1177 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AP003072.5-201ENST00000623872 773 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AP000526.1-201ENST00000603308 1388 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 AP004289.2-201ENST00000444413 1457 ntBASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01558Q9Y6Z2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.4□□□□□ -2.18
LINC01558Q9Y6Z2 AL359851.1-201ENST00000569460 4997 ntBASIC1.4□□□□□ -2.18
LINC01558Q9Y6Z2 ZNF720P1-201ENST00000562403 1939 ntBASIC1.4□□□□□ -2.18
LINC01558Q9Y6Z2 CKAP2P1-201ENST00000555477 2049 ntBASIC1.4□□□□□ -2.18
LINC01558Q9Y6Z2 MTND4P1-201ENST00000457501 1466 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 IGKV7-3-201ENST00000357453 298 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 Y_RNA.62-201ENST00000362840 99 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 U8.4-201ENST00000363626 134 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 SNORA1.3-201ENST00000384676 136 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 MIR129-1-201ENST00000384972 72 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 RNU6-837P-201ENST00000391056 108 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AL355497.1-201ENST00000406262 551 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 RNU2-40P-201ENST00000410833 196 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 SRIP2-201ENST00000428470 166 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 DNAJC19P7-201ENST00000428811 344 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC114973.1-201ENST00000429057 632 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AL513321.1-201ENST00000441175 761 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AL139109.1-201ENST00000455491 297 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 snoU13.3-201ENST00000459441 104 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 RPL7P15-201ENST00000461190 712 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC090515.1-201ENST00000465295 476 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 FAM172BP-201ENST00000487497 1089 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC008427.1-201ENST00000503102 655 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 HIGD1AP14-201ENST00000507617 282 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 SSX6-203ENST00000509958 336 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 OR5BM1P-201ENST00000512021 366 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC092593.2-201ENST00000513866 913 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC025755.1-201ENST00000521306 278 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 HIGD1AP1-201ENST00000550979 275 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC092868.3-201ENST00000560515 784 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 OR1M4P-201ENST00000589199 287 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AC103881.1-201ENST00000603476 538 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 AL451086.1-201ENST00000605596 223 ntBASIC1.4□□□□□ -2.19
LINC01558Q9Y6Z2 RNU4-89P-201ENST00000607443 133 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms