Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 U7.8-201ENST00000619968 63 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC106754.1-201ENST00000562632 1513 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AL161912.2-201ENST00000565707 3007 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 SNORA62.3-201ENST00000365110 153 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 SNORA48.7-201ENST00000391302 135 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 RPL7P60-201ENST00000397636 735 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 OR4K6P-201ENST00000416478 897 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 MTCO2P23-201ENST00000425216 680 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC018644.1-201ENST00000429934 551 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 MOB1AP1-201ENST00000430903 535 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 NANOGP10-201ENST00000453325 895 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 RPL21P129-201ENST00000491732 478 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 UBE2V1P12-201ENST00000503954 474 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 MTCYBP37-201ENST00000510642 1133 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 MTCO3P44-201ENST00000510977 541 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 NARSP2-201ENST00000518524 679 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC027309.2-201ENST00000520566 192 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC007991.1-201ENST00000522680 631 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 OR10V3P-201ENST00000525712 725 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 OR7E13P-201ENST00000526052 910 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AL133457.1-201ENST00000564251 987 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 MIR5187-201ENST00000583479 76 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AL163642.2-201ENST00000604722 1019 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 HMGN2P28-201ENST00000606102 262 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AL391261.4-201ENST00000616012 481 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 CYCSP41-201ENST00000616920 296 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC006133.1-201ENST00000617106 264 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC039056.2-201ENST00000622261 511 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 Z99496.1-201ENST00000469424 1477 ntBASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4BQ9Y4P1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 RNA5SP124-201ENST00000362739 110 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 RNU1-18P-201ENST00000363062 164 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AL359837.1-201ENST00000381357 287 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 U8.11-201ENST00000384699 133 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 U8.12-201ENST00000384701 133 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 MTND4LP20-201ENST00000402379 270 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 BOLA3P4-201ENST00000418151 400 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 DPRXP1-201ENST00000426312 460 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 SEPT7P5-201ENST00000434048 306 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AC093155.1-201ENST00000440164 826 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 ELOCP13-201ENST00000443934 329 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 HMGB3P6-201ENST00000444896 598 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 MTCO1P48-201ENST00000448024 1096 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AL133547.1-201ENST00000448546 220 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 ANP32BP2-201ENST00000454525 545 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 U8.18-201ENST00000459285 133 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AP001086.1-201ENST00000494882 321 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AC084024.2-201ENST00000503480 791 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 SNORA67.7-201ENST00000516664 135 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 SCARNA1-201ENST00000517138 166 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms