Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC004223.4-201ENST00000612426 332 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC122133.1-201ENST00000613964 233 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC091931.1-201ENST00000623488 728 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AF246928.1-201ENST00000623768 87 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AL353743.4-201ENST00000422653 1547 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SIX4Q9UIU6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SIX4Q9UIU6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SIX4Q9UIU6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.09□□□□□ -1.76
SIX4Q9UIU6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SIX4Q9UIU6 AC022031.1-201ENST00000585985 2593 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 RNU6-1066P-201ENST00000363573 105 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 RNA5SP104-201ENST00000410989 118 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC068533.2-201ENST00000411872 306 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL136133.1-201ENST00000413694 376 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 LUZP4P1-201ENST00000415420 344 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 BOLA3P4-201ENST00000418151 400 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 NOTCH2P1-201ENST00000443481 624 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 CDC27P1-201ENST00000445384 715 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 MTND1P29-201ENST00000448112 647 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL500522.2-201ENST00000448562 343 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL034418.1-201ENST00000448675 860 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC239809.1-201ENST00000450470 217 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL445523.1-201ENST00000451184 1362 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL133162.1-201ENST00000463228 453 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC010469.1-201ENST00000463864 576 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 RPS26P15-201ENST00000488067 348 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 OR2A20P-203ENST00000498397 1268 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC108941.1-201ENST00000502853 530 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC091435.1-201ENST00000505442 584 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC020593.1-201ENST00000507399 299 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC087359.1-201ENST00000508335 1740 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 RNU6-202P-201ENST00000515998 96 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC008802.1-201ENST00000519121 791 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AP001207.1-201ENST00000524051 481 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC138915.2-201ENST00000569776 97 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 NBR2-204ENST00000587322 63 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL137849.1-201ENST00000604767 169 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC005344.1-201ENST00000613391 459 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AL121772.2-201ENST00000614331 297 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC039056.2-201ENST00000622261 511 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 AC007494.3-201ENST00000624660 743 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 CR392039.4-201ENST00000624968 501 ntBASIC4.08□□□□□ -1.76
SIX4Q9UIU6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX4Q9UIU6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AP004289.2-201ENST00000444413 1457 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC024560.2-201ENST00000507981 1497 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 RN7SKP202-201ENST00000410439 330 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 FCF1P2-201ENST00000415284 583 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms