Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 RPS29P31-201ENST00000446147 164 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AL590399.6-201ENST00000446396 307 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 Z99714.1-201ENST00000450463 807 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 MTCO3P16-201ENST00000454456 754 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC007967.1-201ENST00000455422 1159 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 HMGN2P7-201ENST00000456186 273 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 RPL32P34-201ENST00000486380 400 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 RNF138P1-201ENST00000502765 546 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 FCF1P8-201ENST00000510322 597 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 HIGD1AP3-201ENST00000515857 278 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 DUXAP6-201ENST00000553858 601 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 DNAJC19P3-201ENST00000594491 331 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC006557.5-201ENST00000603126 811 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 RPAP2P1-201ENST00000603626 1168 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AL161756.2-201ENST00000604597 246 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC005156.1-201ENST00000613371 573 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC121761.2-201ENST00000617300 689 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC004943.3-201ENST00000624116 600 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 SNORA9-201ENST00000384215 133 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 RNU6-328P-201ENST00000390887 106 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 SSXP10-201ENST00000402595 565 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 RPL7P27-201ENST00000403775 720 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 GSTA8P-201ENST00000404253 637 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 MTND5P31-201ENST00000419366 1374 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 OR1AA1P-201ENST00000419597 916 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 SFR1P2-201ENST00000421841 730 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 RPP40P1-201ENST00000426762 456 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC096632.1-201ENST00000427395 310 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 RPL23AP83-201ENST00000434984 473 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 CAB39P1-201ENST00000502277 460 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 TMEM248P1-201ENST00000510579 951 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 Vault.1-201ENST00000516474 102 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 IGKV2-23-201ENST00000518729 323 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 OR5AP1P-201ENST00000529730 940 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC026333.2-201ENST00000542164 106 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC023825.1-201ENST00000566704 1030 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC074051.3-201ENST00000570238 358 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 MIR3186-201ENST00000577404 85 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 MIR5047-201ENST00000579212 100 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AP001542.2-201ENST00000593141 364 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AL009028.1-201ENST00000604895 802 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC099785.1-201ENST00000605697 437 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AP002802.2-201ENST00000605877 235 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC103710.3-201ENST00000608157 948 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC124016.2-201ENST00000610058 665 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC007275.1-201ENST00000621243 671 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AL138955.1-201ENST00000622881 1040 ntBASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLCF1Q9UBD9 AC068647.1-201ENST00000489539 2265 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 CR381670.1-201ENST00000624291 1693 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 PABPC1P7-201ENST00000413177 1513 ntBASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLCF1Q9UBD9 RNU6-236P-201ENST00000363886 106 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms