Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU6-628P-201ENST00000410675 107 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 HMGB1P11-201ENST00000413899 637 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC092647.1-201ENST00000420654 287 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 RPL7P30-201ENST00000420888 709 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 TBCAP1-201ENST00000436520 327 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 RPL23AP46-201ENST00000438548 490 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AL359073.1-201ENST00000448036 403 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL20A1Q9P218 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 RN7SL817P-201ENST00000480777 288 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC090453.1-201ENST00000495560 436 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC108941.1-201ENST00000502853 530 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC093809.1-201ENST00000509155 340 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC091965.2-201ENST00000512324 613 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 RFPL1S-203ENST00000539579 330 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC007115.1-201ENST00000546853 234 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC073544.2-201ENST00000601155 540 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 RPL23AP92-201ENST00000603609 255 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AL031775.1-201ENST00000607014 887 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AL596275.2-204ENST00000641628 552 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 AL596275.2-206ENST00000641957 626 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL20A1Q9P218 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL20A1Q9P218 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL20A1Q9P218 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL20A1Q9P218 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL20A1Q9P218 FAM91A3P-201ENST00000456826 2544 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 Z95327.2-201ENST00000414579 1873 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL20A1Q9P218 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC104118.1-201ENST00000607625 1589 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AL592437.2-201ENST00000421655 2434 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL20A1Q9P218 OR10J6P-201ENST00000289731 930 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 RPL23AP57-201ENST00000332361 466 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC067945.1-201ENST00000342609 618 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 RNU4-21P-201ENST00000362802 126 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 RNA5SP513-201ENST00000364648 118 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 RNU1-64P-201ENST00000365443 163 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC007066.1-201ENST00000392902 381 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 MIR320C1-201ENST00000408566 88 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 FNDC3CP-201ENST00000420795 1155 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC004448.2-201ENST00000422360 586 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 BMI1P1-201ENST00000445879 941 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 PAXBP1P1-201ENST00000449315 447 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 IFNWP4-201ENST00000453148 294 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 RNU7-136P-201ENST00000458819 69 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 RPL30P9-201ENST00000465586 330 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC012158.1-204ENST00000483430 465 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 VN1R105P-201ENST00000486595 910 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC010424.1-201ENST00000506336 297 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 RPL12P22-201ENST00000519073 490 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AP000873.5-201ENST00000533906 236 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC034105.4-201ENST00000568304 277 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC128687.1-201ENST00000605304 619 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC107214.2-201ENST00000608204 634 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC064801.1-201ENST00000612025 407 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 AC025588.4-201ENST00000615802 908 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 MIR4496-201ENST00000635896 61 ntBASIC4.7□□□□□ -1.66
COL20A1Q9P218 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL20A1Q9P218 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
COL20A1Q9P218 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL20A1Q9P218 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms