Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SNORD116-23-201ENST00000384645 92 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 PTMAP5-201ENST00000393073 333 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC119751.3-201ENST00000399720 670 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AL139098.1-201ENST00000407291 389 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AL136133.1-201ENST00000413694 376 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AL049737.1-201ENST00000413920 1403 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 MRPS36P1-201ENST00000421291 307 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 RPL23AP38-201ENST00000423801 469 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 ATP5F1P1-201ENST00000433775 569 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC091390.1-201ENST00000433904 331 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 SNORA71B-202ENST00000439232 272 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC092393.1-201ENST00000439625 742 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 CBX1P1-201ENST00000440184 427 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 MTATP6P26-201ENST00000445926 662 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 TPT1P12-201ENST00000448968 492 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 NDUFA12P1-201ENST00000455914 406 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 HMGB3P30-201ENST00000457863 606 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 RPS4XP2-201ENST00000458402 793 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 RN7SL442P-201ENST00000473804 320 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 TMED11P-201ENST00000479478 690 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 ZNF542P-204ENST00000482727 1305 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 VPS26AP1-201ENST00000483197 979 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC020893.1-201ENST00000502452 580 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 OR5H4P-201ENST00000510851 923 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 RNA5SP135-201ENST00000517019 125 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC087808.1-201ENST00000520501 361 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 C1GALT1P3-201ENST00000522049 819 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AP001207.1-201ENST00000524051 481 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 NBEAP1-201ENST00000554452 979 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 HIGD1AP17-201ENST00000554576 276 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 GTF2IP8-201ENST00000560687 584 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 DUXAP3-201ENST00000603616 594 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC131235.4-201ENST00000609288 620 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC023158.2-201ENST00000614876 543 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AL133383.2-201ENST00000622958 2336 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 MIR7641-1-201ENST00000627518 61 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 AC116618.1-201ENST00000634617 774 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC025125.1-201ENST00000624743 1922 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC104454.1-201ENST00000421341 1401 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 MIR30E-201ENST00000362104 92 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 RNU5D-1-201ENST00000363299 116 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 RNA5SP391-201ENST00000363456 119 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 RNA5SP447-201ENST00000363749 119 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 RNU6-560P-201ENST00000364007 108 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 RPL23AP47-201ENST00000408017 460 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 RPS7P13-201ENST00000413955 498 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC069213.2-201ENST00000420238 366 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AL691449.1-201ENST00000426570 421 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 DNAJC19P7-201ENST00000428811 344 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC010881.1-201ENST00000433830 235 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 USP9YP22-201ENST00000438971 294 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 MTCYBP11-201ENST00000447254 1109 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 RPL21P134-201ENST00000453468 483 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 RFC5P1-201ENST00000454419 874 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC010486.2-201ENST00000505572 483 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.56□□□□□ -1.84
NDE1Q9NXR1 TXNP6-201ENST00000510190 310 ntBASIC3.56□□□□□ -1.84
NDE1Q9NXR1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms