Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 ANAPC10P1-201ENST00000395991 556 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 SOD2P1-201ENST00000396543 562 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 VDAC1P3-201ENST00000434069 851 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 MTND2P19-201ENST00000449129 1012 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 OR9M1P-201ENST00000459641 921 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 RPL21P11-201ENST00000461458 483 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 MTND1P16-201ENST00000465177 898 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC010285.1-201ENST00000470580 392 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC020898.1-201ENST00000474167 787 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 MTCO3P35-201ENST00000485582 781 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC006390.1-201ENST00000508068 283 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 RNU6-583P-201ENST00000516012 92 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 RNU6-27P-201ENST00000516146 107 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 RNA5SP208-201ENST00000516156 78 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 SNORA31.20-201ENST00000517111 133 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 OR8R1P-201ENST00000543943 764 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AL133457.1-201ENST00000564251 987 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC023813.2-201ENST00000564321 469 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 LARP7P2-201ENST00000575306 125 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 CCDC58P3-201ENST00000590792 430 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 FP236240.3-201ENST00000623061 327 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AL079343.1-201ENST00000572358 1771 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 RNU6-629P-201ENST00000384061 103 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AL445669.2-201ENST00000454425 421 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 VN1R17P-201ENST00000472048 1090 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 VN1R105P-201ENST00000486595 910 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC090453.1-201ENST00000495560 436 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 HMGB1P22-201ENST00000505315 124 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 BTF3L4P4-201ENST00000506381 449 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC010460.1-201ENST00000507087 466 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC079395.1-201ENST00000510981 262 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC104986.1-201ENST00000517978 436 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 RFPL1S-203ENST00000539579 330 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC009712.1-201ENST00000564938 316 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AL360157.1-201ENST00000565962 87 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 MIR3160-1-201ENST00000577972 85 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC053481.4-201ENST00000583164 216 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 BNIP3P11-201ENST00000603878 563 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AL356473.1-201ENST00000406203 1408 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 AC097714.1-201ENST00000511272 1647 ntBASIC4.28□□□□□ -1.72
BLOC1S4Q9NUP1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.28□□□□□ -1.73
BLOC1S4Q9NUP1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 RNU6-621P-201ENST00000364752 109 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms