Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AF117829.1-206ENST00000621883 3802 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU6-989P-201ENST00000362756 107 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RNA5SP51-201ENST00000364750 119 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 MIR525-201ENST00000384978 85 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RPL21P17-201ENST00000397467 475 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AL356967.1-201ENST00000406305 431 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RPL32P35-201ENST00000415214 394 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RPL21P133-201ENST00000443666 476 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 HMGB1P15-201ENST00000453854 435 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC104308.1-201ENST00000454621 333 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 SNORD105B-201ENST00000458770 79 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RN7SL283P-201ENST00000489055 303 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RN7SKP13-201ENST00000515933 244 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU1-61P-201ENST00000516107 151 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU6-416P-201ENST00000516265 103 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 RNA5SP468-201ENST00000516782 93 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AL513477.2-201ENST00000607858 568 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 MIR6798-201ENST00000612887 67 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC020658.4-201ENST00000613987 684 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC105227.2-201ENST00000615075 605 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC097372.4-201ENST00000625025 466 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AC032011.1-201ENST00000611703 1549 ntBASIC3.14□□□□□ -1.91
CCNB1IP1Q9NPC3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC117529.2-201ENST00000512159 2068 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU6-50P-201ENST00000362356 103 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 RNA5SP258-201ENST00000362750 119 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU6-761P-201ENST00000384148 107 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU6-921P-201ENST00000384361 107 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC025750.1-201ENST00000399891 379 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC233981.1-201ENST00000423224 461 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 HSFY1P1-201ENST00000423928 1178 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC092017.2-201ENST00000427600 362 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 OR2AS1P-201ENST00000427827 319 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 MTCO3P43-201ENST00000440974 771 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 RPL21P47-201ENST00000483696 477 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC093278.1-201ENST00000494700 600 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 MTND3P24-201ENST00000506306 329 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC023632.4-201ENST00000517783 191 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC007991.1-201ENST00000522680 631 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC124293.1-201ENST00000530034 493 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AL731537.2-201ENST00000561565 951 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 AC006116.10-201ENST00000591836 581 ntBASIC3.13□□□□□ -1.91
CCNB1IP1Q9NPC3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms