Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CD248Q9HCU0 MUC2-202ENST00000613187 4845 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD248Q9HCU0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD248Q9HCU0 RNA5SP191-201ENST00000362585 102 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RNU6-433P-201ENST00000363216 104 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RNU6-1339P-201ENST00000363574 91 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RNU1-32P-201ENST00000363937 159 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RNA5SP505-201ENST00000364748 108 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 RNU6-1279P-201ENST00000383917 103 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RNU6-332P-201ENST00000391193 108 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 Y_RNA.598-201ENST00000410480 95 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RNU4-55P-201ENST00000410731 137 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 FCF1P2-201ENST00000415284 583 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 MTND2P23-201ENST00000422990 651 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RPL30P3-201ENST00000424262 333 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC009238.2-201ENST00000431026 355 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RPS29P9-201ENST00000440360 171 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC073264.2-201ENST00000448886 166 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 DNAJC19P8-201ENST00000452887 259 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC005008.1-201ENST00000456151 612 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RN7SL319P-201ENST00000480656 221 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RN7SL459P-201ENST00000481078 302 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RPS29P25-201ENST00000481709 171 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 RPS3AP14-201ENST00000483907 780 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 SNORA18.6-201ENST00000516792 115 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 Y_RNA.704-201ENST00000516851 102 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 IGJP1-201ENST00000522682 475 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AP006289.1-201ENST00000538089 277 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 CBX3P5-201ENST00000552017 521 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC091042.1-201ENST00000579213 173 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 MIR3667-201ENST00000581025 74 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AC068790.4-201ENST00000602474 263 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 MIR7641-1-201ENST00000627518 61 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 MIR3662-201ENST00000637030 95 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 MIR1321-201ENST00000637766 79 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD248Q9HCU0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 AL136964.1-201ENST00000622038 2990 ntBASIC5.08□□□□□ -1.6
CD248Q9HCU0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CD248Q9HCU0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CD248Q9HCU0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD248Q9HCU0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD248Q9HCU0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD248Q9HCU0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD248Q9HCU0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC126755.2-208ENST00000327792 462 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC138969.1-213ENST00000331436 462 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD248Q9HCU0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 RNU6-317P-201ENST00000384031 107 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 RNU6-244P-201ENST00000391028 104 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD248Q9HCU0 U3.32-201ENST00000408116 212 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 AF186996.5-201ENST00000418098 904 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 RPS27AP14-201ENST00000422868 454 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 AL356583.2-201ENST00000426536 280 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 AL359265.2-201ENST00000434367 631 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD248Q9HCU0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 TPT1P13-201ENST00000449760 499 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 RN7SL443P-201ENST00000464331 290 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 RNU6-416P-201ENST00000516265 103 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 RNU6-1045P-201ENST00000516321 107 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 ARL2BPP5-201ENST00000523141 481 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC012182.1-201ENST00000570133 895 ntBASIC5.07□□□□□ -1.6
CD248Q9HCU0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms