Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL645937.1-202ENST00000421799 937 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AC011037.1-201ENST00000483964 558 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AC083906.5-201ENST00000503722 328 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 MIR3162-201ENST00000581818 82 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AC012119.1-201ENST00000603184 222 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AC084373.1-201ENST00000603311 235 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AP003485.2-201ENST00000623636 610 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 MAPK10-362ENST00000641864 4484 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AL356057.3-201ENST00000402607 340 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AC093151.1-201ENST00000427711 313 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 RPL21P18-201ENST00000469899 480 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AC111000.5-201ENST00000506559 1178 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AL590240.3-201ENST00000621416 943 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 MIR6733-201ENST00000635723 61 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 YPEL5P1-201ENST00000419731 367 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AC021205.1-201ENST00000468797 348 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AP001025.2-201ENST00000490908 477 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 MTATP6P22-201ENST00000507369 598 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AC243972.3-201ENST00000539655 198 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AC027176.1-201ENST00000560204 514 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AP005205.1-201ENST00000563503 508 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AC234778.2-201ENST00000566241 354 ntBASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.5□□□□□ -2.01
KIAA1549Q9HCM3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AL139039.1-201ENST00000401900 692 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 RN7SKP123-201ENST00000410732 291 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 MTCYBP29-201ENST00000436327 1006 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 RNU7-27P-201ENST00000459281 62 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 TRAV31-201ENST00000502780 342 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 HIGD1AP3-201ENST00000515857 278 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AL049874.4-201ENST00000557593 255 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 RNU6-532P-201ENST00000384318 107 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 MIR34A-201ENST00000385130 110 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 RPS4XP8-201ENST00000402039 771 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 RNA5SP80-201ENST00000410475 111 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AC004987.3-201ENST00000413879 771 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 VDAC1P3-201ENST00000434069 851 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 RPL23AP74-201ENST00000437246 471 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AC092185.1-201ENST00000491371 97 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AC055876.1-202ENST00000567053 138 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 ABI1P1-201ENST00000603375 1120 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AC012213.4-201ENST00000606457 354 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AC005046.1-201ENST00000608515 625 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 AP004607.9-201ENST00000618202 316 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 MIR4278-201ENST00000636094 69 ntBASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
KIAA1549Q9HCM3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 AC111000.2-201ENST00000507775 550 ntBASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 RNU6-319P-201ENST00000516025 108 ntBASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms