Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 RNY1P12-201ENST00000364251 105 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 RNY3P13-201ENST00000365542 102 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 RNU6-456P-201ENST00000384493 107 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 MIR551A-201ENST00000385042 96 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 MIR223-201ENST00000385204 110 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 RNU1-77P-201ENST00000390868 162 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 HMGN1P24-201ENST00000412282 298 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AL353193.1-201ENST00000421444 268 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC093156.1-201ENST00000440382 670 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC010655.1-201ENST00000449336 292 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC108059.3-201ENST00000456388 214 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 RN7SL51P-201ENST00000468230 285 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 RN7SL814P-201ENST00000487715 300 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 Y_RNA.693-201ENST00000516641 110 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AL133271.1-201ENST00000538229 291 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AL512360.1-201ENST00000555346 234 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 RN7SL356P-201ENST00000582228 248 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 RN7SL435P-201ENST00000584418 282 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AL512782.1-201ENST00000603093 364 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AP000907.4-201ENST00000604143 237 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AL031176.1-201ENST00000604554 466 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC090948.1-201ENST00000607464 549 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC004908.2-201ENST00000609090 574 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 RPSAP73-201ENST00000614820 330 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC006338.1-201ENST00000618453 749 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 AC132068.1-201ENST00000623805 459 ntBASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM55Q9BYV6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 Y_RNA.88-201ENST00000363029 99 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 RNY3P14-201ENST00000384309 102 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 USP9YP6-201ENST00000413550 854 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 OR1AA1P-201ENST00000419597 916 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC137499.1-201ENST00000427602 88 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 OR4K11P-201ENST00000431829 904 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 CYCSP6-201ENST00000434498 302 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 NFU1P2-201ENST00000448700 469 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 PPIAP3-201ENST00000450588 505 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 NANOGP10-201ENST00000453325 895 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC092754.1-201ENST00000472975 479 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC090686.1-201ENST00000481577 749 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC231760.1-201ENST00000498002 260 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 PGAM1P13-201ENST00000507497 754 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC008694.2-201ENST00000517591 306 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AP003072.2-201ENST00000527756 676 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC109635.3-201ENST00000529536 185 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AP000857.1-201ENST00000532151 543 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AL512310.1-201ENST00000548639 172 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 MIR548S-201ENST00000581352 82 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms