Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL121766.1-201ENST00000547436 487 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 CCNG2P1-201ENST00000549521 1000 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC012435.1-202ENST00000568772 240 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC022655.2-201ENST00000577280 318 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AL031985.2-201ENST00000600955 480 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AF131215.7-201ENST00000602443 707 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC010680.4-201ENST00000605334 543 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC080013.6-201ENST00000606185 215 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 SNORA51-201ENST00000606420 132 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AL357080.1-201ENST00000617394 239 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 U73479.1-201ENST00000618062 168 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC005086.4-201ENST00000623065 213 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC015871.5-202ENST00000623252 701 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AP001273.1-201ENST00000624493 3152 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC097714.1-201ENST00000511272 1647 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 RNA5SP387-201ENST00000364226 106 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 SNORA73.2-201ENST00000364946 201 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 SNORD82-201ENST00000365530 70 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 SNORD116-1-201ENST00000384335 95 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 RNU1-44P-201ENST00000384453 163 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 CRYBB2P1-203ENST00000415709 538 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 SEPT2P1-201ENST00000419651 180 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 OFD1P18Y-201ENST00000420889 959 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AL035410.1-201ENST00000427409 427 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 MTND1P20-201ENST00000430341 950 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 RPL23AP46-201ENST00000438548 490 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AL831737.1-201ENST00000441288 271 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 HSPE1P28-201ENST00000443139 211 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 NOTCH2P1-201ENST00000443481 624 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 SUMO2P2-201ENST00000456482 255 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 RNU7-136P-201ENST00000458819 69 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AF213884.1-201ENST00000488102 463 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 RPS6P4-201ENST00000494693 758 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AC093809.1-201ENST00000509155 340 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 LTV1P1-201ENST00000510683 1237 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 HMGB3P26-201ENST00000560051 582 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 MIR3915-201ENST00000578518 97 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 MIR3944-201ENST00000581277 108 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AC025588.3-201ENST00000604182 274 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AL121772.2-201ENST00000614331 297 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AL354798.1-201ENST00000622505 329 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AP006248.2-201ENST00000623309 592 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AC067931.1-201ENST00000624190 671 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 AC007494.3-201ENST00000624660 743 ntBASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTFDC1Q9BY42 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 SNORD46.1-201ENST00000364139 104 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 RNU6-761P-201ENST00000384148 107 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 MIR153-1-201ENST00000384914 90 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 SNORD96B-201ENST00000386148 79 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 MT-TC-201ENST00000387405 66 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 RPL17P50-201ENST00000396131 546 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AL031679.1-201ENST00000400616 525 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms