Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RPS17P5-201ENST00000498293 408 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RPL39P5-202ENST00000512505 151 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC026782.1-201ENST00000512952 449 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC026801.2-201ENST00000515352 425 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.665-201ENST00000516177 98 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.682-201ENST00000516457 100 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 SCARNA24.1-201ENST00000516465 137 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RNA5SP34-201ENST00000516887 130 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RNU6-1137P-201ENST00000517073 99 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RPL7P20-201ENST00000520308 745 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 HMGB1P40-201ENST00000525121 540 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 COPS8P3-201ENST00000526024 482 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AP005403.1-201ENST00000579720 229 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 SNORD39.3-201ENST00000584451 71 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AP001029.3-201ENST00000588063 596 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AL512329.2-201ENST00000607350 548 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC005014.2-201ENST00000607795 599 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC090510.2-201ENST00000617465 629 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 MAPK10-328ENST00000641553 4009 ntBASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SSBP3Q9BWW4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 CASC19-204ENST00000641001 2055 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 MTND5P10-201ENST00000603719 1809 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 OR1S2-201ENST00000302592 978 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 U3.7-201ENST00000363668 216 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RNA5SP335-201ENST00000363817 110 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RNY4P16-201ENST00000364768 94 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.339-201ENST00000365325 102 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.530-201ENST00000384587 101 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RPL7P60-201ENST00000397636 735 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RNU6-985P-201ENST00000410182 104 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RNU6-370P-201ENST00000411008 104 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RNU6-1304P-201ENST00000411374 106 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RPSAP35-201ENST00000413753 818 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC114482.1-201ENST00000418010 247 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RPL12P17-201ENST00000432393 498 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 GSTM5P1-201ENST00000434751 660 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AL049734.2-201ENST00000441066 616 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 MED28P3-201ENST00000444288 531 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AL161722.1-201ENST00000446972 1032 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RPL23AP15-201ENST00000450202 459 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 U8.20-201ENST00000459445 131 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RPL23AP41-201ENST00000484754 458 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC025164.1-201ENST00000496249 478 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RNA5SP337-201ENST00000517007 109 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RNU6-1271P-201ENST00000517049 105 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 NARSP2-201ENST00000518524 679 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AP003497.1-201ENST00000528472 562 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 APOOP3-201ENST00000536787 586 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AL161670.1-201ENST00000554348 137 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC005341.1-201ENST00000571086 708 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms