Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC009643.1-201ENST00000532030 391 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC026333.2-201ENST00000542164 106 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC009097.3-201ENST00000563557 1018 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC022662.1-201ENST00000580252 331 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 NF1P5-201ENST00000588287 448 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AP003973.1-201ENST00000604639 691 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC006077.1-201ENST00000604746 343 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 RNA5SP108-201ENST00000605921 117 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 MIR6500-201ENST00000622700 86 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 MTND4P8-201ENST00000514997 1362 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 RNU6-839P-201ENST00000363347 108 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 RNU6-213P-201ENST00000384051 104 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 MTND4P22-201ENST00000413116 1169 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 NDUFB4P5-201ENST00000415445 361 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 ELOCP9-201ENST00000418624 239 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC007435.1-201ENST00000421086 415 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 DPRXP1-201ENST00000426312 460 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AL031736.2-201ENST00000426573 787 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 FTH1P1-201ENST00000437933 532 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC004865.1-201ENST00000442276 1003 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 PTENP1-201ENST00000447117 1215 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 PNPLA4P1-201ENST00000458328 305 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 RPL21P103-201ENST00000479921 488 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC126121.1-201ENST00000482313 553 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 DYNLL1P6-201ENST00000503440 264 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC048346.1-201ENST00000510247 144 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 SNORA64.4-201ENST00000516632 81 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 OR4A2P-201ENST00000527276 913 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 DUXAP6-201ENST00000553858 601 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 OR4U1P-201ENST00000554958 912 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 SERPINE4P-201ENST00000554978 281 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC120057.2-201ENST00000571520 271 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 CLIC4P2-201ENST00000601934 717 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 MTND3P19-201ENST00000603825 345 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC107952.2-201ENST00000606048 486 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC007349.4-201ENST00000608114 532 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC021755.4-201ENST00000616620 456 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC243756.2-201ENST00000618406 463 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AL158163.2-201ENST00000619110 700 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AL355480.1-201ENST00000629041 99 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 MIR492-201ENST00000638676 116 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 AC007823.1-201ENST00000569932 1566 ntBASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC28BQ9BUN5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AC007656.2-201ENST00000624902 4547 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 MIR148B-201ENST00000362252 99 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 U3.11-201ENST00000364476 212 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 MIR217-201ENST00000384817 110 ntBASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC28BQ9BUN5 RPL37P1-201ENST00000432310 284 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms