Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX3Q99909 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSX3Q99909 ERHP2-201ENST00000402323 299 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AL590084.1-201ENST00000407885 387 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SSX3Q99909 RNA5SP36-201ENST00000410197 133 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.47□□□□□ -1.85
SSX3Q99909 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX3Q99909 AC079780.1-201ENST00000428259 207 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AL606517.1-201ENST00000446914 387 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 ABCF2P2-201ENST00000450549 296 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 SSXP4-201ENST00000451349 245 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.47□□□□□ -1.85
SSX3Q99909 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX3Q99909 BTF3P5-201ENST00000457252 467 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 RPL7P22-201ENST00000466005 733 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.47□□□□□ -1.85
SSX3Q99909 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX3Q99909 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.47□□□□□ -1.85
SSX3Q99909 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX3Q99909 AC008958.1-201ENST00000511047 682 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 RN7SKP31-201ENST00000516354 278 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 RNA5SP49-201ENST00000516450 115 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 RNA5SP468-201ENST00000516782 93 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AP003730.1-201ENST00000524605 285 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX3Q99909 AC125611.1-201ENST00000549563 229 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX3Q99909 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX3Q99909 BNIP3P26-201ENST00000600827 554 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AL354984.3-201ENST00000604803 325 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AC105148.1-201ENST00000604961 409 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.47□□□□□ -1.85
SSX3Q99909 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.47□□□□□ -1.85
SSX3Q99909 AP000240.1-201ENST00000609910 452 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AC092628.2-201ENST00000622492 339 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSX3Q99909 AC120349.2-201ENST00000625002 298 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 CYP3A51P-201ENST00000633513 256 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 AC244205.2-202ENST00000635781 342 ntBASIC3.47□□□□□ -1.85
SSX3Q99909 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSX3Q99909 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSX3Q99909 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSX3Q99909 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SSX3Q99909 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSX3Q99909 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.47□□□□□ -1.85
SSX3Q99909 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
SSX3Q99909 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SSX3Q99909 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSX3Q99909 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SSX3Q99909 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSX3Q99909 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.46□□□□□ -1.86
SSX3Q99909 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSX3Q99909 AL121657.1-201ENST00000327215 531 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 RNU6-636P-201ENST00000384598 107 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 MIR591-201ENST00000385290 95 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 ARF4P3-201ENST00000397387 509 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 SNRPEP2-201ENST00000397592 279 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 EI24P2-201ENST00000397776 1076 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX3Q99909 YPEL5P1-201ENST00000419731 367 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 MFSD13B-201ENST00000420133 1290 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AL157831.1-201ENST00000426134 473 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.46□□□□□ -1.86
SSX3Q99909 AC004975.1-201ENST00000428733 208 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.46□□□□□ -1.86
SSX3Q99909 SETP5-201ENST00000437270 562 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AC083863.1-201ENST00000438811 231 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 RPL23AP89-201ENST00000439324 255 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 TXNP1-201ENST00000441872 371 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.46□□□□□ -1.86
SSX3Q99909 MTCO2P25-201ENST00000447065 681 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AC114755.5-201ENST00000447760 831 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.46□□□□□ -1.86
SSX3Q99909 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX3Q99909 AC012181.1-201ENST00000479895 423 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSX3Q99909 AC108941.1-201ENST00000502853 530 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.46□□□□□ -1.86
SSX3Q99909 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.46□□□□□ -1.86
SSX3Q99909 MTCO1P35-201ENST00000515270 228 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX3Q99909 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX3Q99909 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.46□□□□□ -1.86
SSX3Q99909 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.46□□□□□ -1.86
SSX3Q99909 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX3Q99909 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX3Q99909 AL109766.1-201ENST00000555080 552 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX3Q99909 AC009974.1-201ENST00000608881 455 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSX3Q99909 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.46□□□□□ -1.86
SSX3Q99909 AL050303.3-201ENST00000613704 284 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AC019278.1-201ENST00000623516 479 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 AL078595.3-201ENST00000623815 1166 ntBASIC3.46□□□□□ -1.86
SSX3Q99909 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.46□□□□□ -1.86
SSX3Q99909 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.46□□□□□ -1.86
SSX3Q99909 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms