Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 HSPD1P16-201ENST00000402302 394 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 RNA5SP31-201ENST00000411144 127 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 RPS3AP37-201ENST00000419176 745 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 XKRYP1-201ENST00000423438 492 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 XKRYP2-201ENST00000432915 492 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AL031663.1-201ENST00000437445 219 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC243772.1-201ENST00000451620 410 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 PTGES3P5-201ENST00000455109 434 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 RN7SL504P-201ENST00000494496 287 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC098862.1-201ENST00000504991 413 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 RNU6-416P-201ENST00000516265 103 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 RNU1-143P-201ENST00000516296 146 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 RN7SKP60-201ENST00000516985 239 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 IGJP1-201ENST00000522682 475 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 U1.23-201ENST00000610293 146 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 VN1R74P-201ENST00000613259 503 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 RNU1-68P-201ENST00000615382 146 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC009159.2-201ENST00000617603 606 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 U1.39-201ENST00000621562 146 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC026422.1-201ENST00000623961 452 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC092608.3-201ENST00000625017 386 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 AC099786.3-201ENST00000565735 1410 ntBASIC4.7□□□□□ -1.66
SIN3AQ96ST3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIN3AQ96ST3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AL356489.2-201ENST00000566968 3528 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 SNORD46.1-201ENST00000364139 104 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 RNA5SP387-201ENST00000364226 106 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 RNU6-304P-201ENST00000364855 107 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 RPS12P23-201ENST00000419579 400 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC073069.1-201ENST00000428657 441 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC234064.1-201ENST00000436312 247 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 RPS7P5-201ENST00000441482 581 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AL589880.1-201ENST00000448271 287 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC098826.2-201ENST00000452011 651 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 RNU6-1218P-201ENST00000458990 108 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC112673.1-201ENST00000513168 575 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 snoZ278.1-201ENST00000517059 112 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 IGKV2-36-201ENST00000519999 223 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC010306.1-201ENST00000523223 1117 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 LRRC34P1-201ENST00000542742 915 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 CCDC58P3-201ENST00000590792 430 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 VN1R88P-201ENST00000596787 292 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AL592295.2-201ENST00000612578 206 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 AC009313.2-201ENST00000417893 1941 ntBASIC4.69□□□□□ -1.66
SIN3AQ96ST3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIN3AQ96ST3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 RNU4-68P-201ENST00000364314 141 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 RNA5SP72-201ENST00000364442 117 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 MIR525-201ENST00000384978 85 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 MIR513B-201ENST00000385136 84 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC012065.2-201ENST00000421295 375 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 RAC1P8-201ENST00000427086 527 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms