Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 MIR3160-1-201ENST00000577972 85 ntBASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 SNORD39.3-201ENST00000584451 71 ntBASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 AC008687.2-201ENST00000597865 520 ntBASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 AC008785.1-201ENST00000624475 456 ntBASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNGAP1Q96PV0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 RNU6-853P-201ENST00000364306 107 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 RNU6-74P-201ENST00000384235 107 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 RNU6-510P-201ENST00000391239 108 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 RPL32P23-201ENST00000397237 405 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 RN7SKP140-201ENST00000411196 284 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 RNU2-6P-201ENST00000411404 190 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AL591848.1-201ENST00000413092 322 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 SNRPFP1-201ENST00000414761 252 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AC073136.2-201ENST00000417282 849 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AC016691.1-201ENST00000441321 413 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 FAM103A2P-201ENST00000444122 354 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 RPS4XP18-201ENST00000495480 763 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AC010587.1-201ENST00000505809 469 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 GAPDHP56-201ENST00000506031 988 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AC123904.2-201ENST00000548059 300 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AC020661.2-201ENST00000560114 134 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 MIR3167-201ENST00000579623 85 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AC017100.2-201ENST00000584628 355 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AL031320.1-201ENST00000604177 357 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AL590392.1-201ENST00000604960 446 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AL354950.2-201ENST00000617939 290 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 AC233309.1-201ENST00000619522 751 ntBASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNGAP1Q96PV0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SYNGAP1Q96PV0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
SYNGAP1Q96PV0 AC002525.1-201ENST00000624392 1622 ntBASIC5.84□□□□□ -1.48
SYNGAP1Q96PV0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.84□□□□□ -1.48
SYNGAP1Q96PV0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SYNGAP1Q96PV0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 RN7SKP153-201ENST00000365026 316 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 RNU1-74P-201ENST00000384108 171 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-738P-201ENST00000384531 106 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-1158P-201ENST00000391167 107 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 DHFRP6-201ENST00000401776 268 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC004975.1-201ENST00000428733 208 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC012123.2-201ENST00000485809 248 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AP001025.2-201ENST00000490908 477 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC022133.1-201ENST00000490961 571 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 UBA52P3-201ENST00000491303 382 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 OR5B19P-201ENST00000531766 928 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 PDCD5P1-201ENST00000543528 309 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC019322.1-201ENST00000571869 389 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 MIR3171-201ENST00000584270 74 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AP001521.2-201ENST00000608772 546 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC104237.2-201ENST00000612456 443 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC010205.1-201ENST00000616668 449 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AC090617.10-201ENST00000624308 134 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms