Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC017078.1-201ENST00000416146 368 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AC108032.1-201ENST00000416706 207 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AL353777.1-201ENST00000425552 326 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AC119618.1-201ENST00000434191 222 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 MTND1P17-201ENST00000448961 204 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 RN7SL51P-201ENST00000468230 285 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 RNU6-410P-201ENST00000517006 107 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AC021678.3-201ENST00000517893 476 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AP000857.1-201ENST00000532151 543 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AP001804.2-201ENST00000533932 910 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AC005261.2-201ENST00000593427 4258 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AC092447.9-201ENST00000603395 144 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AC007938.2-201ENST00000604666 2634 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 SDR42E1P2-201ENST00000614861 481 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 PISRT1.1-201ENST00000616930 107 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 SDR42E1P4-201ENST00000620894 481 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 U6.104-201ENST00000637979 90 ntBASIC6.63□□□□□ -1.35
TRIM47Q96LD4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM47Q96LD4 XPOTP1-201ENST00000443317 2398 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 Y_RNA.274-201ENST00000364714 101 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 Y_RNA.297-201ENST00000364950 91 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 RNU6-730P-201ENST00000383954 104 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 Y_RNA.424-201ENST00000384063 103 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 Y_RNA.428-201ENST00000384078 102 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 RNU6-1140P-201ENST00000410517 106 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AL590399.2-201ENST00000427536 309 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 RPL21P110-201ENST00000433345 446 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AL450023.1-201ENST00000450868 751 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 RNU6-475P-201ENST00000516073 104 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 SNORD116.3-201ENST00000517176 78 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AC022616.4-201ENST00000522985 181 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AL137161.1-201ENST00000532231 390 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 HSPE1P20-201ENST00000538133 289 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AL049839.1-201ENST00000556151 657 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 BNIP3P25-201ENST00000596023 559 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 AC133644.2-201ENST00000608142 540 ntBASIC6.62□□□□□ -1.35
TRIM47Q96LD4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM47Q96LD4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 RNU6-490P-201ENST00000362985 107 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 RN7SKP103-201ENST00000363848 320 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 RNU6-378P-201ENST00000384324 107 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 SNORD116-23-201ENST00000384645 92 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 SNORA75.6-201ENST00000391318 127 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 AL606923.1-201ENST00000406616 190 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 RNU2-20P-201ENST00000410425 191 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 AL136133.1-201ENST00000413694 376 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 AC114814.2-201ENST00000419195 485 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 RPL7P4-203ENST00000430239 730 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM47Q96LD4 AC019185.1-201ENST00000442718 389 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 RPL21P133-201ENST00000443666 476 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 CBX1P2-201ENST00000453841 458 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 CEACAMP10-202ENST00000495431 496 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 AC114801.2-201ENST00000503825 781 ntBASIC6.61□□□□□ -1.35
TRIM47Q96LD4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms