Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 MFSD8-216ENST00000641147 4009 ntBASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP3Q96JB5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 RNU1-15P-201ENST00000353977 144 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 RNA5SP502-201ENST00000362694 119 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 RNA5SP447-201ENST00000363749 119 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 RNU6-356P-201ENST00000384140 107 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 RNY3P10-201ENST00000384764 102 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC097374.1-203ENST00000400783 485 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 DHFRP6-201ENST00000401776 268 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 HMGB1P17-201ENST00000403495 628 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AL024474.1-201ENST00000404655 591 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 RNA5SP239-201ENST00000410218 129 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC009480.2-201ENST00000422916 432 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AL512649.1-201ENST00000428997 581 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 SNRPEP7-201ENST00000438350 220 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 PPIAP3-201ENST00000450588 505 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC013356.1-201ENST00000489027 564 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 RN7SL810P-201ENST00000493031 276 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC012170.1-201ENST00000495139 359 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 MIR3611-201ENST00000584484 83 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC103710.4-201ENST00000609301 899 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AL021997.2-201ENST00000615674 271 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC090116.1-201ENST00000615679 446 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC006065.5-201ENST00000623427 349 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC025048.6-202ENST00000627667 438 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC055839.1-201ENST00000634467 498 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AC130650.2-201ENST00000618736 2403 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 AL122126.1-201ENST00000546905 1318 ntBASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK5RAP3Q96JB5 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC136624.1-201ENST00000400791 413 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 RN7SKP216-201ENST00000411050 312 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 DNAJC19P7-201ENST00000428811 344 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC068287.1-201ENST00000430283 295 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 RPL23AP24-201ENST00000458203 385 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 SNORD108-201ENST00000459332 71 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 RN7SL98P-201ENST00000462271 300 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC017015.1-201ENST00000477387 286 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC022447.1-201ENST00000515358 464 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 PHBP17-201ENST00000528576 541 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 OR6C7P-201ENST00000547875 934 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms