Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HPS3Q969F9 KPNA2P2-201ENST00000419546 1489 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HPS3Q969F9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HPS3Q969F9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HPS3Q969F9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HPS3Q969F9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HPS3Q969F9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HPS3Q969F9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC067945.1-201ENST00000342609 618 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 MIR331-201ENST00000362302 94 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 RNU6-777P-201ENST00000364265 104 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 Y_RNA.559-201ENST00000384686 107 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 MIR129-1-201ENST00000384972 72 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 MIR1911-201ENST00000410783 80 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 ZNF885P-201ENST00000420174 1098 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.86□□□□□ -1.63
HPS3Q969F9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AC002381.1-201ENST00000447049 280 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 ST13P20-201ENST00000447996 1065 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC005297.2-201ENST00000450430 606 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AL445669.2-201ENST00000454425 421 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AP000797.1-201ENST00000478870 387 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC025881.1-201ENST00000518851 512 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AL139174.1-201ENST00000531489 886 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 HMGB3P26-201ENST00000560051 582 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 RPL23AP97-201ENST00000568955 471 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AC012213.3-201ENST00000577199 777 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AP001180.3-201ENST00000582221 145 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 MIR3611-201ENST00000584484 83 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC012065.4-201ENST00000602445 679 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AL355812.1-201ENST00000603215 216 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AP000403.1-201ENST00000603349 851 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AC008745.1-201ENST00000604064 271 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC007546.1-201ENST00000619452 559 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AL023881.1-201ENST00000621088 301 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AL359715.5-201ENST00000623431 443 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC093591.3-201ENST00000634516 308 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HPS3Q969F9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.86□□□□□ -1.63
HPS3Q969F9 PABPC1P7-201ENST00000413177 1513 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HPS3Q969F9 AC017104.4-201ENST00000636283 1592 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 IQCB2P-201ENST00000401788 1633 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 AC125257.1-201ENST00000560400 2930 ntBASIC4.86□□□□□ -1.63
HPS3Q969F9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HPS3Q969F9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS3Q969F9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.85□□□□□ -1.63
HPS3Q969F9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS3Q969F9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS3Q969F9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS3Q969F9 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HPS3Q969F9 RNU6-28P-201ENST00000362378 107 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 RNU5F-6P-201ENST00000362979 116 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
HPS3Q969F9 RNU6-730P-201ENST00000383954 104 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 SNORA70E-201ENST00000384492 135 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 U8.14-201ENST00000390843 143 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 RPS3AP23-201ENST00000401762 784 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 MTCYBP36-201ENST00000404146 440 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 SNORA74C-2-201ENST00000411179 201 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS3Q969F9 RPL31P45-201ENST00000419532 356 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AC006366.1-201ENST00000422002 759 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AC127537.2-201ENST00000439258 465 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AC239367.2-201ENST00000447309 705 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AL162591.2-201ENST00000449634 317 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 HMGB1P15-201ENST00000453854 435 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 SNRPFP4-201ENST00000456366 242 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AK3P4-201ENST00000504283 583 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AC010625.1-201ENST00000511296 403 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AC034159.1-201ENST00000513885 583 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms