Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC011233.1-201ENST00000422812 283 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC096632.1-201ENST00000427395 310 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 RPL36P19-201ENST00000430744 301 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 RPS25P9-201ENST00000435591 252 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 MTCO3P11-201ENST00000455103 774 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 RPL18AP17-201ENST00000455326 198 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 MTCO3P2-201ENST00000457365 171 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 snoU13.7-201ENST00000459220 104 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC087879.1-201ENST00000474343 374 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 BET1P1-201ENST00000482276 359 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC005726.1-201ENST00000494679 427 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 SNX5P1-201ENST00000505757 1041 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 OR5AK1P-201ENST00000524837 922 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC090888.1-201ENST00000561335 1141 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC090877.1-201ENST00000561418 344 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 SNORD39.3-201ENST00000584451 71 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 VN1R90P-201ENST00000595717 726 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AL109653.1-201ENST00000603091 248 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC010680.3-201ENST00000604215 520 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AP001521.1-201ENST00000609150 300 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 MIR6716-201ENST00000613413 80 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AL136981.2-201ENST00000617319 734 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 AC244205.2-202ENST00000635781 342 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 ZNF37BP-203ENST00000452306 1352 ntBASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SLC44A1Q8WWI5 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 HSPA8P1-201ENST00000425843 1833 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 EXOC5P1-201ENST00000510543 1969 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 LARP1BP1-201ENST00000506036 1359 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 RNU11-4P-201ENST00000391149 133 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 MIR1284-201ENST00000408337 120 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AL133384.1-201ENST00000412744 351 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 USP9YP26-201ENST00000421008 661 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 RPL21P109-201ENST00000422213 475 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AL022400.1-201ENST00000423946 935 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 FTH1P6-201ENST00000430768 320 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 NUTF2P3-201ENST00000448540 384 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 FTH1P2-201ENST00000466086 412 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 RPS20P21-201ENST00000466859 343 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 RPS27AP13-201ENST00000498403 237 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 HMGB1P21-201ENST00000502313 581 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 RPF2P2-201ENST00000504693 896 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 CYCSP29-201ENST00000533731 318 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC090502.2-201ENST00000549267 280 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC090616.2-202ENST00000584248 222 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC113194.1-201ENST00000606037 500 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 MIR6868-201ENST00000611215 58 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC092650.2-201ENST00000619984 902 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms