Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO3Q8TAP4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO3Q8TAP4 AC093535.2-201ENST00000624769 2326 ntBASIC4.07□□□□□ -1.76
LMO3Q8TAP4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO3Q8TAP4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
LMO3Q8TAP4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LMO3Q8TAP4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO3Q8TAP4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO3Q8TAP4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO3Q8TAP4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO3Q8TAP4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 Y_RNA.6-201ENST00000362350 114 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 RNU6-1119P-201ENST00000384349 108 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AL009174.1-201ENST00000426577 416 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 OR4F13P-201ENST00000428478 931 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC022034.3-201ENST00000471393 478 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 VN1R105P-201ENST00000486595 910 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 IGJP1-201ENST00000522682 475 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC008126.1-201ENST00000549019 480 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AL512347.1-201ENST00000566420 503 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 OR4K7P-201ENST00000580232 945 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AL160394.1-201ENST00000624765 724 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC068724.3-201ENST00000625906 87 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 AC127502.3-201ENST00000636170 1206 ntBASIC4.06□□□□□ -1.76
LMO3Q8TAP4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
LMO3Q8TAP4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 MIR30B-201ENST00000384850 88 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AL512430.2-201ENST00000406786 339 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 HSPE1P8-201ENST00000406997 288 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 RN7SKP142-201ENST00000411236 328 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 FCF1P9-201ENST00000412546 282 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AL161449.1-201ENST00000414531 1199 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 NDUFB1P1-201ENST00000435191 180 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AL450263.2-201ENST00000439400 589 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 MTND4P18-201ENST00000447010 465 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 KATNBL1P6-201ENST00000453433 915 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 RPL7P48-201ENST00000461513 746 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC037198.2-201ENST00000478845 733 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 VPS26AP1-201ENST00000483197 979 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 DYNLL1P6-201ENST00000503440 264 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 RN7SKP31-201ENST00000516354 278 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 MIR2116-201ENST00000517221 80 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 MTND4LP26-201ENST00000518144 282 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 CYCSP30-201ENST00000546447 172 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC008083.2-201ENST00000546707 476 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AL133457.1-201ENST00000564251 987 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 MIR3160-1-201ENST00000577972 85 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC087499.8-201ENST00000578406 226 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 MIR548Y-201ENST00000582739 110 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC008507.1-201ENST00000587506 734 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC087683.1-201ENST00000591187 441 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC005255.1-201ENST00000593748 216 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC022146.1-201ENST00000595307 847 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AL031775.1-201ENST00000607014 887 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms