Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NUP35Q8NFH5 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
NUP35Q8NFH5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NUP35Q8NFH5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NUP35Q8NFH5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.3□□□□□ -2.04
NUP35Q8NFH5 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NUP35Q8NFH5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.3□□□□□ -2.04
NUP35Q8NFH5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 ASNSP3-201ENST00000451989 1306 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 RNU4-35P-201ENST00000362588 141 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 RNU6-799P-201ENST00000363567 107 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 RNU6-374P-201ENST00000364146 108 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AJ239321.1-201ENST00000424255 564 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC091390.1-201ENST00000433904 331 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 RPS29P6-201ENST00000438196 145 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC108734.1-201ENST00000439549 399 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC069540.1-201ENST00000446320 988 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 ELOCP23-201ENST00000452014 332 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 PRDX3P4-201ENST00000470828 747 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC104689.1-201ENST00000473356 768 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC091959.2-201ENST00000477363 321 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 RPS27AP9-201ENST00000477681 438 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC105914.1-201ENST00000511798 226 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 RN7SKP18-201ENST00000516005 275 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 RN7SKP283-201ENST00000517197 270 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 HSPE1P20-201ENST00000538133 289 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AADACP1-206ENST00000561502 1193 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 MIR2682-201ENST00000580305 110 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC009220.3-201ENST00000604318 586 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 BNIP3P7-201ENST00000605641 516 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC024941.1-201ENST00000612250 334 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AL020991.1-201ENST00000612314 373 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC095031.1-201ENST00000623685 672 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC016717.3-201ENST00000624730 554 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 AL161431.1-201ENST00000618966 4205 ntBASIC2.29□□□□□ -2.04
NUP35Q8NFH5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP35Q8NFH5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AC009487.2-201ENST00000420969 6821 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 RNU4-78P-201ENST00000410940 126 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 UBE2D3P2-201ENST00000424409 445 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 NOTCH2P1-201ENST00000443481 624 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 RPS17P11-201ENST00000474297 293 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AC015908.1-201ENST00000478739 476 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AC126121.1-201ENST00000482313 553 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AC009901.1-201ENST00000506703 541 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 PRELID3BP5-201ENST00000508612 460 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 SNORA70.17-201ENST00000516449 133 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 RNU6-826P-201ENST00000516827 104 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 HIGD1AP1-201ENST00000550979 275 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AL049874.4-201ENST00000557593 255 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 MIR4504-201ENST00000577413 92 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
NUP35Q8NFH5 CCDC58P3-201ENST00000590792 430 ntBASIC2.28□□□□□ -2.04
NUP35Q8NFH5 AC135178.6-201ENST00000605314 398 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms