Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC080128.1-201ENST00000474389 1917 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 RNU6-482P-201ENST00000391068 107 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 RN7SL20P-201ENST00000488827 297 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC008549.1-201ENST00000512900 643 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 SYT14P1-202ENST00000600441 1448 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC114546.3-201ENST00000623582 1734 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC091152.2-201ENST00000591628 2569 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AL161781.1-201ENST00000354277 403 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 RPL21P41-201ENST00000459863 264 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC004801.2-202ENST00000463559 283 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AL442163.2-201ENST00000553912 710 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 SERPINE4P-201ENST00000554978 281 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 EI24P2-201ENST00000397776 1076 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AL845331.3-202ENST00000562856 261 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC011492.1-201ENST00000600023 315 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AL035413.2-201ENST00000604801 525 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC017071.1-201ENST00000564407 2204 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 RPS3AP26-201ENST00000398259 784 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AL356057.1-202ENST00000402263 756 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 MTCO3P21-201ENST00000430791 643 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC105272.1-201ENST00000438604 198 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC010468.1-201ENST00000461022 817 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 PRDX3P4-201ENST00000470828 747 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 TRAV31-201ENST00000502780 342 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 ABI1P1-201ENST00000603375 1120 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC105402.1-201ENST00000413336 545 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 RPL32P35-201ENST00000415214 394 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AL645937.1-202ENST00000421799 937 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 NDUFS5P3-201ENST00000450668 321 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 HMGN1P18-201ENST00000457642 277 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC126121.1-201ENST00000482313 553 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 RNA5SP217-201ENST00000515959 91 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AP003102.1-201ENST00000525638 661 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 OR4A45P-201ENST00000529954 901 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AP000919.1-202ENST00000581139 1264 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 Y_RNA.140-201ENST00000363474 103 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 SNRPGP5-201ENST00000456003 220 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 RN7SKP5-201ENST00000517045 272 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 RNU6-548P-201ENST00000517083 115 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC0.87□□□□□ -2.27
SYNE1Q8NF91 GTF3AP2-201ENST00000557014 266 ntBASIC0.87□□□□□ -2.27
SYNE1Q8NF91 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RPL23AP36-201ENST00000413895 458 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 Z98742.3-201ENST00000418637 326 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 DPPA2P1-201ENST00000428060 556 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AP001004.1-201ENST00000582468 324 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AP006248.2-201ENST00000623309 592 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC092608.2-201ENST00000624427 218 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 SNORA71.1-201ENST00000364523 117 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 Y_RNA.269-201ENST00000364685 89 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE1Q8NF91 AC062016.1-201ENST00000355719 319 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 RNU6-283P-201ENST00000364788 107 ntBASIC0.86□□□□□ -2.27
SYNE1Q8NF91 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms