Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC024595.1-201ENST00000623088 387 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AC097460.3-201ENST00000623099 442 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 RPL7P26-201ENST00000333817 754 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 RNA5SP383-201ENST00000362934 120 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 SNORA51.2-201ENST00000364595 132 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 SAR1AP2-201ENST00000392696 594 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 TAF9BP1-201ENST00000396646 746 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC092745.2-202ENST00000411880 369 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC012498.1-201ENST00000424037 437 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 FABP5P3-201ENST00000437960 408 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 RPS15AP1-201ENST00000457423 391 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 RPL21P104-201ENST00000464143 478 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC110794.1-201ENST00000505816 425 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 MTND2P26-201ENST00000528255 1029 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 OR6C73P-201ENST00000546432 358 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 CCNG2P1-201ENST00000549521 1000 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 RN7SL339P-201ENST00000580597 296 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC006023.2-201ENST00000609916 167 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC009464.1-201ENST00000615731 469 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AL445493.3-201ENST00000619568 477 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AC091903.1-201ENST00000624322 454 ntBASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC65Q8IXS2 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.59□□□□□ -1.84
CCDC65Q8IXS2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 SNORD56.4-201ENST00000363883 71 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 RNA5SP293-201ENST00000410527 113 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AL445183.3-201ENST00000414168 502 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 HMGB1P48-201ENST00000446155 598 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 PRDX3P3-201ENST00000447765 522 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AC108860.1-201ENST00000484521 383 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 SNORA26.10-201ENST00000516427 141 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AC010306.1-201ENST00000523223 1117 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AP000916.1-201ENST00000533869 835 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AC006518.1-201ENST00000541449 943 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 CKS1BP3-201ENST00000600888 237 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AL133393.1-201ENST00000603277 287 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AL359535.1-201ENST00000612100 1087 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 RMST_10.1-201ENST00000616309 154 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AC073569.3-201ENST00000619055 682 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 MIR7975-201ENST00000619350 68 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AC008432.1-201ENST00000615912 1320 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 MTND4P8-201ENST00000514997 1362 ntBASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CCDC65Q8IXS2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 SNORD56.3-201ENST00000363507 71 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 MIR7-3-201ENST00000384898 110 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 PRRC2CP1-201ENST00000404428 159 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AC063979.1-201ENST00000415539 377 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 BX890604.2-201ENST00000427883 474 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 OR2B8P-201ENST00000432841 938 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 RPS26P30-201ENST00000443431 335 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 RPL29P29-201ENST00000448725 423 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms