Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 MIR1-2-201ENST00000384961 85 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 RNA5SP296-201ENST00000410523 111 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 OR1AA1P-201ENST00000419597 916 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 MED13P1-201ENST00000428342 171 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 PPIAP3-201ENST00000450588 505 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 CEACAMP6-201ENST00000452007 574 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC009127.1-201ENST00000467090 155 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC007537.2-201ENST00000472093 511 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC114797.1-201ENST00000514003 728 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 RNU6-1045P-201ENST00000516321 107 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 RN7SKP147-201ENST00000517154 244 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 RNA5SP373-201ENST00000517271 95 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC122688.1-201ENST00000541494 223 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AL121821.2-201ENST00000556081 394 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 AC138649.5-201ENST00000637456 137 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 MTND5P42-201ENST00000637720 498 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC104118.1-201ENST00000607625 1589 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 Y_RNA.72-201ENST00000362894 103 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 MIR105-1-201ENST00000385222 81 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 RNU6-1158P-201ENST00000391167 107 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC068050.1-201ENST00000394891 380 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 RNU2-47P-201ENST00000410649 186 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC092162.1-201ENST00000432828 434 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 MTCYBP6-201ENST00000441810 138 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC108161.1-201ENST00000461060 402 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 RPL39P36-201ENST00000490784 156 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 RPS17P5-201ENST00000498293 408 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 NIFKP7-201ENST00000503365 834 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 SNORD60.2-201ENST00000516883 86 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC128657.1-201ENST00000549459 145 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 LSM3P2-201ENST00000551246 273 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC078814.3-201ENST00000553036 491 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 IGHV3-29-201ENST00000604817 344 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms