Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CRYM-AS1-204ENST00000637983 556 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
NHLRC1Q6VVB1 AC097714.1-201ENST00000511272 1647 ntBASIC3.59□□□□□ -1.84
NHLRC1Q6VVB1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 RNA5SP130-201ENST00000364431 114 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 Y_RNA.465-201ENST00000384293 102 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 RNU6-584P-201ENST00000410350 95 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 MTATP6P27-201ENST00000416987 621 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AL137014.1-201ENST00000420490 1226 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 CYP4F29P-201ENST00000420685 446 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 NANOGP5-201ENST00000424456 877 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 MOB1AP1-201ENST00000430903 535 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 TBCAP1-201ENST00000436520 327 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 RPS4XP4-201ENST00000443195 763 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 RPS11P1-201ENST00000451072 473 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 HMGB1P15-201ENST00000453854 435 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 RPL38P1-201ENST00000460914 211 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 MTND1P16-201ENST00000465177 898 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 RPL7P24-201ENST00000493052 752 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 MLLT10P2-201ENST00000506434 249 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AC090695.1-201ENST00000561269 1222 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AC009712.1-201ENST00000564938 316 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AC025627.2-201ENST00000576220 160 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AP001269.3-201ENST00000588718 329 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AC245036.5-201ENST00000596330 847 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AC069304.2-201ENST00000605154 435 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 MIR6868-201ENST00000611215 58 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AC091925.2-201ENST00000625059 256 ntBASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NHLRC1Q6VVB1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AL121657.1-201ENST00000327215 531 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 RNU4-92P-201ENST00000363783 136 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 RNU6-173P-201ENST00000364215 104 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 CYCSP45-201ENST00000402289 315 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 MTCO2P8-201ENST00000412213 658 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 PSMA6P3-201ENST00000428242 164 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 NANOGP2-201ENST00000435391 727 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 MUPP-201ENST00000438111 566 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 OR10R1P-201ENST00000441524 1141 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 HSPE1P28-201ENST00000443139 211 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC005410.1-202ENST00000460347 485 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 RPL7P19-201ENST00000469948 618 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC103987.1-201ENST00000473394 348 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC090453.1-201ENST00000495560 436 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 RPL29P14-201ENST00000495837 428 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC068305.1-201ENST00000497406 726 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 HMGB1P22-201ENST00000505315 124 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC010342.1-201ENST00000514047 877 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 RNU6-583P-201ENST00000516012 92 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 RN7SKP31-201ENST00000516354 278 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 RN7SKP244-201ENST00000516513 307 ntBASIC3.57□□□□□ -1.84
NHLRC1Q6VVB1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms