Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NIPAL3Q6P499 AC073073.2-201ENST00000609827 2578 ntBASIC3.35□□□□□ -1.87
NIPAL3Q6P499 Z99496.1-201ENST00000469424 1477 ntBASIC3.35□□□□□ -1.87
NIPAL3Q6P499 AC024560.2-201ENST00000507981 1497 ntBASIC3.35□□□□□ -1.87
NIPAL3Q6P499 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AP001148.1-201ENST00000624124 2359 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC244517.1-201ENST00000606030 2086 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 RN7SKP280-201ENST00000364196 304 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 SUGT1P1-201ENST00000379514 476 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 Y_RNA.578-201ENST00000390903 88 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 SNORA57.3-201ENST00000411095 141 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 MTCO1P3-201ENST00000429327 192 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 BMS1P19-201ENST00000433925 393 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 RPL21P133-201ENST00000443666 476 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC099563.1-201ENST00000456086 418 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 RPS3AP50-201ENST00000487064 803 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 NIPA2P2-201ENST00000496376 1083 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 KLRA1P-201ENST00000503499 986 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC093853.1-201ENST00000515689 483 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 RNU6-1028P-201ENST00000517164 93 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AP001189.2-201ENST00000527320 189 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 OR4P1P-201ENST00000530808 1136 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AL020997.2-201ENST00000602607 184 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AL163642.2-201ENST00000604722 1019 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC092650.2-201ENST00000619984 902 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AP002371.2-201ENST00000624450 503 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC092184.1-201ENST00000625042 715 ntBASIC3.34□□□□□ -1.87
NIPAL3Q6P499 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NIPAL3Q6P499 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.34□□□□□ -1.88
NIPAL3Q6P499 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 RNU6-50P-201ENST00000362356 103 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 RNU6-707P-201ENST00000364647 95 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 RNU6-657P-201ENST00000383904 107 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AL079342.2-201ENST00000403367 482 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AP000567.1-201ENST00000406413 156 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 TCEA1P2-201ENST00000420496 906 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 USP9YP21-201ENST00000420603 432 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AL139247.1-201ENST00000422768 325 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 HMGB3P5-201ENST00000428894 612 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AL590103.1-201ENST00000434488 307 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 snoU13.4-201ENST00000458916 104 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 CAB39P1-201ENST00000502277 460 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 SUMO2P5-201ENST00000506790 245 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AC069306.1-201ENST00000507006 843 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AC027309.2-201ENST00000520566 192 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AC106785.1-201ENST00000565935 262 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms