Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC092641.1-201ENST00000440229 772 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AL138878.2-201ENST00000440581 1241 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 RPS18P6-201ENST00000476880 458 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 BX284632.1-201ENST00000478218 541 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC007686.1-201ENST00000488511 463 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 RPL23AP72-201ENST00000492447 435 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AP003497.1-201ENST00000528472 562 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 CR383656.7-201ENST00000548164 174 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AGGF1P4-201ENST00000568249 801 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 MIR1269B-201ENST00000580405 75 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC146944.4-201ENST00000602697 718 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AL031176.1-201ENST00000604554 466 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 MEMO1P5-201ENST00000604810 406 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 OR10AB1P-201ENST00000609613 938 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC093799.2-201ENST00000610062 578 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AC138932.5-201ENST00000617759 563 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AL590240.3-201ENST00000621416 943 ntBASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF220Q5VTB9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AL445487.1-201ENST00000415694 1580 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 SAMMSON-226ENST00000642089 1582 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 DHX40P1-201ENST00000588725 1412 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 RPL23P2-201ENST00000320371 421 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 Y_RNA.46-201ENST00000362695 102 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 RNU4-75P-201ENST00000364621 146 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 SNORA70-201ENST00000384436 135 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AL357515.1-201ENST00000402967 542 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 TBCAP2-201ENST00000416175 326 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 RPEP2-201ENST00000432149 701 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 RPS24P1-201ENST00000438550 371 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AL163193.1-201ENST00000444895 788 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 MTND1P9-201ENST00000453775 944 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC099563.1-201ENST00000456086 418 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 OR9M1P-201ENST00000459641 921 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 RPS26P39-201ENST00000469206 341 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC013356.1-201ENST00000489027 564 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC017037.2-201ENST00000513850 890 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 RNU6-201P-201ENST00000517100 61 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 ZNF519P3-201ENST00000557158 1032 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 MIR4489-201ENST00000578869 62 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 SNORA74C-1-201ENST00000580726 201 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC087683.1-201ENST00000591187 441 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC006116.3-201ENST00000592968 361 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC068790.2-201ENST00000602601 557 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC010424.2-201ENST00000607594 443 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AL139089.1-201ENST00000620372 975 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 CR381572.2-201ENST00000624852 397 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AL392088.2-201ENST00000637607 285 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms