Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC002456.2-201ENST00000509356 380 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 RNU6-202P-201ENST00000515998 96 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFX4Q33E94 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX4Q33E94 AC084824.1-201ENST00000550917 1005 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX4Q33E94 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX4Q33E94 MTCO1P40-201ENST00000574371 625 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX4Q33E94 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX4Q33E94 AC020914.6-201ENST00000594327 272 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 SNRPGP15-201ENST00000600149 222 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 SNORA51-201ENST00000606420 132 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AC013468.1-201ENST00000608680 598 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AL731566.2-201ENST00000618971 317 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AC093875.1-201ENST00000623688 504 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX4Q33E94 AL109659.3-201ENST00000624985 950 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AL121594.5-201ENST00000631724 573 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX4Q33E94 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX4Q33E94 XPOTP1-201ENST00000443317 2398 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AC073055.1-201ENST00000456901 1621 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AC025263.3-201ENST00000622965 1396 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX4Q33E94 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AC008264.2-201ENST00000610193 3731 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 RNU6-353P-201ENST00000364266 108 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 SNORA51.2-201ENST00000364595 132 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 U6.112-201ENST00000384129 70 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 RNU6-1151P-201ENST00000384684 107 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 RN7SKP111-201ENST00000410349 271 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 RNA5SP44-201ENST00000410446 133 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 RNU6-272P-201ENST00000411028 104 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AL035423.1-201ENST00000420331 213 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AC012498.1-201ENST00000424037 437 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 RPL36P19-201ENST00000430744 301 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 RPL21P110-201ENST00000433345 446 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AL050341.1-201ENST00000447743 313 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AC115115.1-201ENST00000449927 248 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.1□□□□□ -1.91
RFX4Q33E94 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AC091959.2-201ENST00000477363 321 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.1□□□□□ -1.91
RFX4Q33E94 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AC016065.2-201ENST00000514530 444 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 RN7SKP96-201ENST00000516948 297 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AP003066.2-201ENST00000529375 555 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX4Q33E94 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AC055876.1-202ENST00000567053 138 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AC067852.3-201ENST00000589177 561 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AP002906.1-201ENST00000603405 233 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AL591516.1-201ENST00000611326 274 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.1□□□□□ -1.91
RFX4Q33E94 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX4Q33E94 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX4Q33E94 AC006249.1-201ENST00000621223 471 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RFX4Q33E94 AL590396.4-201ENST00000636779 956 ntBASIC3.1□□□□□ -1.91
RFX4Q33E94 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
RFX4Q33E94 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFX4Q33E94 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFX4Q33E94 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX4Q33E94 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.1□□□□□ -1.91
RFX4Q33E94 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX4Q33E94 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFX4Q33E94 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RFX4Q33E94 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX4Q33E94 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RFX4Q33E94 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RFX4Q33E94 SNORA51.12-201ENST00000384448 134 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 MIR525-201ENST00000384978 85 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 SNORA57.1-201ENST00000391227 145 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 MIR1193-201ENST00000408109 78 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AL513175.1-201ENST00000431492 780 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 AC244505.4-201ENST00000434905 287 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 RPS7P2-201ENST00000435134 607 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.09□□□□□ -1.91
RFX4Q33E94 SSXP5-201ENST00000443473 287 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 RPS15AP1-201ENST00000457423 391 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.09□□□□□ -1.91
RFX4Q33E94 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AC093801.2-201ENST00000503966 1050 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms