Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MIR7112-201ENST00000616126 65 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AC121761.2-201ENST00000617300 689 ntBASIC3.14□□□□□ -1.91
VSX2P58304 SNORD39.4-201ENST00000620099 78 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.14□□□□□ -1.91
VSX2P58304 AP003400.6-201ENST00000624698 740 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AL356118.1-201ENST00000635272 1078 ntBASIC3.14□□□□□ -1.91
VSX2P58304 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
VSX2P58304 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VSX2P58304 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
VSX2P58304 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
VSX2P58304 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VSX2P58304 AC010733.2-201ENST00000589496 5702 ntBASIC3.14□□□□□ -1.91
VSX2P58304 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VSX2P58304 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VSX2P58304 RNU1-75P-201ENST00000347264 129 ntBASIC3.13□□□□□ -1.91
VSX2P58304 SNORA38.1-201ENST00000364172 131 ntBASIC3.13□□□□□ -1.91
VSX2P58304 RNA5SP189-201ENST00000364920 115 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AL357075.1-201ENST00000404107 726 ntBASIC3.13□□□□□ -1.91
VSX2P58304 BTBD10P2-201ENST00000404779 676 ntBASIC3.13□□□□□ -1.91
VSX2P58304 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX2P58304 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.13□□□□□ -1.91
VSX2P58304 NUP35P2-201ENST00000416748 943 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AC012065.2-201ENST00000421295 375 ntBASIC3.13□□□□□ -1.91
VSX2P58304 GLRXP1-201ENST00000423261 334 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AC073508.1-201ENST00000428866 656 ntBASIC3.13□□□□□ -1.91
VSX2P58304 RPL36P19-201ENST00000430744 301 ntBASIC3.13□□□□□ -1.91
VSX2P58304 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.13□□□□□ -1.91
VSX2P58304 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX2P58304 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.13□□□□□ -1.91
VSX2P58304 MTND2P30-201ENST00000456663 382 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.13□□□□□ -1.91
VSX2P58304 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.13□□□□□ -1.91
VSX2P58304 AC110794.1-201ENST00000505816 425 ntBASIC3.13□□□□□ -1.91
VSX2P58304 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.13□□□□□ -1.91
VSX2P58304 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.13□□□□□ -1.91
VSX2P58304 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX2P58304 AC025768.1-201ENST00000510057 267 ntBASIC3.13□□□□□ -1.91
VSX2P58304 TXNP6-201ENST00000510190 310 ntBASIC3.13□□□□□ -1.91
VSX2P58304 SNORA76.2-201ENST00000517095 137 ntBASIC3.13□□□□□ -1.91
VSX2P58304 RPL12P22-201ENST00000519073 490 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AC010306.1-201ENST00000523223 1117 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.13□□□□□ -1.91
VSX2P58304 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.13□□□□□ -1.91
VSX2P58304 LINC00557-201ENST00000563184 1279 ntBASIC3.13□□□□□ -1.91
VSX2P58304 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.13□□□□□ -1.91
VSX2P58304 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX2P58304 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX2P58304 AC011468.4-201ENST00000603942 409 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AC073657.2-201ENST00000605661 303 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AL157817.1-201ENST00000614264 790 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AC009464.1-201ENST00000615731 469 ntBASIC3.13□□□□□ -1.91
VSX2P58304 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.13□□□□□ -1.91
VSX2P58304 AL079305.1-201ENST00000623159 3008 ntBASIC3.13□□□□□ -1.91
VSX2P58304 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VSX2P58304 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.13□□□□□ -1.91
VSX2P58304 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.12□□□□□ -1.91
VSX2P58304 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX2P58304 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VSX2P58304 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VSX2P58304 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VSX2P58304 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX2P58304 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.12□□□□□ -1.91
VSX2P58304 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX2P58304 AC006028.1-201ENST00000438379 402 ntBASIC3.12□□□□□ -1.91
VSX2P58304 ATP5C1P1-201ENST00000441945 895 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX2P58304 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.12□□□□□ -1.91
VSX2P58304 Z75741.1-201ENST00000446793 314 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.12□□□□□ -1.91
VSX2P58304 AC125238.1-201ENST00000448842 249 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.12□□□□□ -1.91
VSX2P58304 SLC31A1P1-201ENST00000451221 567 ntBASIC3.12□□□□□ -1.91
VSX2P58304 BX276092.4-201ENST00000452056 248 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AL035407.2-201ENST00000454090 378 ntBASIC3.12□□□□□ -1.91
VSX2P58304 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.12□□□□□ -1.91
VSX2P58304 HIGD1AP3-201ENST00000515857 278 ntBASIC3.12□□□□□ -1.91
VSX2P58304 RNU4-60P-201ENST00000517239 135 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.12□□□□□ -1.91
VSX2P58304 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
VSX2P58304 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VSX2P58304 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.12□□□□□ -1.91
VSX2P58304 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.12□□□□□ -1.91
VSX2P58304 AC104229.1-201ENST00000561364 255 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC106734.1-201ENST00000568646 663 ntBASIC3.12□□□□□ -1.91
VSX2P58304 MIR5680-201ENST00000577577 84 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.12□□□□□ -1.91
VSX2P58304 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX2P58304 AL365400.2-201ENST00000605604 902 ntBASIC3.12□□□□□ -1.91
VSX2P58304 HMGN2P28-201ENST00000606102 262 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.12□□□□□ -1.91
VSX2P58304 AC011816.2-201ENST00000607089 556 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC090425.2-201ENST00000608818 501 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC018926.3-201ENST00000618841 406 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC092184.1-201ENST00000625042 715 ntBASIC3.12□□□□□ -1.91
VSX2P58304 MIR3651-201ENST00000630427 90 ntBASIC3.12□□□□□ -1.91
VSX2P58304 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VSX2P58304 AC007496.3-201ENST00000624987 3443 ntBASIC3.12□□□□□ -1.91
VSX2P58304 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms