Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH12P55289 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH12P55289 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH12P55289 MTND5P29-201ENST00000458676 1807 ntBASIC3.98□□□□□ -1.77
CDH12P55289 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH12P55289 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH12P55289 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH12P55289 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH12P55289 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH12P55289 SSXP10-201ENST00000402595 565 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AL024474.1-201ENST00000404655 591 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH12P55289 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH12P55289 AL139095.3-201ENST00000419672 1203 ntBASIC3.98□□□□□ -1.77
CDH12P55289 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH12P55289 OR5BE1P-201ENST00000425977 939 ntBASIC3.98□□□□□ -1.77
CDH12P55289 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH12P55289 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH12P55289 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH12P55289 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH12P55289 MUPP-201ENST00000438111 566 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH12P55289 ARPC3P5-201ENST00000448802 534 ntBASIC3.98□□□□□ -1.77
CDH12P55289 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH12P55289 USP9YP34-201ENST00000453983 808 ntBASIC3.98□□□□□ -1.77
CDH12P55289 DNAJC19P1-201ENST00000455312 319 ntBASIC3.98□□□□□ -1.77
CDH12P55289 CFTRP1-201ENST00000456646 183 ntBASIC3.98□□□□□ -1.77
CDH12P55289 RPS20P21-201ENST00000466859 343 ntBASIC3.98□□□□□ -1.77
CDH12P55289 RPL21P126-201ENST00000470049 478 ntBASIC3.98□□□□□ -1.77
CDH12P55289 RPL31P50-201ENST00000471002 296 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AC090453.1-201ENST00000495560 436 ntBASIC3.98□□□□□ -1.77
CDH12P55289 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH12P55289 AC025554.1-201ENST00000505641 188 ntBASIC3.98□□□□□ -1.77
CDH12P55289 ARL2BPP4-201ENST00000506854 471 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH12P55289 AC025881.1-201ENST00000518851 512 ntBASIC3.98□□□□□ -1.77
CDH12P55289 HSPA8P13-201ENST00000523715 472 ntBASIC3.98□□□□□ -1.77
CDH12P55289 OR5BC1P-201ENST00000529327 739 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AP004247.1-201ENST00000531556 1289 ntBASIC3.98□□□□□ -1.77
CDH12P55289 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH12P55289 AC084783.1-201ENST00000565846 910 ntBASIC3.98□□□□□ -1.77
CDH12P55289 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH12P55289 AC090312.1-201ENST00000580637 348 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH12P55289 MIR4512-201ENST00000583257 77 ntBASIC3.98□□□□□ -1.77
CDH12P55289 BNIP3P23-201ENST00000599655 511 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AC079089.3-201ENST00000603094 673 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AC008782.1-201ENST00000603386 430 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AC079587.1-201ENST00000603846 277 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AL161616.1-201ENST00000611867 286 ntBASIC3.98□□□□□ -1.77
CDH12P55289 MIR6780A-201ENST00000615089 68 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AC027807.2-201ENST00000616099 408 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AL357080.1-201ENST00000617394 239 ntBASIC3.98□□□□□ -1.77
CDH12P55289 AP005019.3-201ENST00000620418 560 ntBASIC3.98□□□□□ -1.77
CDH12P55289 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH12P55289 AP001784.1-201ENST00000624107 428 ntBASIC3.98□□□□□ -1.77
CDH12P55289 OR5BE1P-202ENST00000641168 1176 ntBASIC3.98□□□□□ -1.77
CDH12P55289 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH12P55289 ERCC6-202ENST00000374127 1782 ntBASIC3.98□□□□□ -1.77
CDH12P55289 MFSD8-242ENST00000641690 4199 ntBASIC3.98□□□□□ -1.77
CDH12P55289 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH12P55289 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH12P55289 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH12P55289 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CDH12P55289 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH12P55289 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH12P55289 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH12P55289 AL122126.1-201ENST00000546905 1318 ntBASIC3.97□□□□□ -1.77
CDH12P55289 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH12P55289 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH12P55289 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDH12P55289 RAD17P1-201ENST00000418130 2042 ntBASIC3.97□□□□□ -1.77
CDH12P55289 DHX40P1-201ENST00000588725 1412 ntBASIC3.97□□□□□ -1.77
CDH12P55289 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH12P55289 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH12P55289 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDH12P55289 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH12P55289 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC008033.1-201ENST00000216407 1162 ntBASIC3.97□□□□□ -1.77
CDH12P55289 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH12P55289 OR4K15-201ENST00000305051 1216 ntBASIC3.97□□□□□ -1.77
CDH12P55289 RPL23AP57-201ENST00000332361 466 ntBASIC3.97□□□□□ -1.77
CDH12P55289 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH12P55289 RN7SKP103-201ENST00000363848 320 ntBASIC3.97□□□□□ -1.77
CDH12P55289 SNORA58B-201ENST00000364259 136 ntBASIC3.97□□□□□ -1.77
CDH12P55289 RNU6-343P-201ENST00000364709 104 ntBASIC3.97□□□□□ -1.77
CDH12P55289 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH12P55289 MIR708-201ENST00000390708 88 ntBASIC3.97□□□□□ -1.77
CDH12P55289 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH12P55289 Y_RNA.619-201ENST00000410951 90 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC007899.1-201ENST00000412776 775 ntBASIC3.97□□□□□ -1.77
CDH12P55289 RPL17P12-201ENST00000413391 526 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH12P55289 RPS15AP40-201ENST00000419621 391 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH12P55289 RPS20P1-201ENST00000434853 354 ntBASIC3.97□□□□□ -1.77
CDH12P55289 SNRPEP7-201ENST00000438350 220 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC006466.1-201ENST00000438721 289 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AL031667.1-201ENST00000440222 725 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms