Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SNORA11-201ENST00000408789 128 ntBASIC4.59□□□□□ -1.67
COPAP53621 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 AL035410.1-201ENST00000427409 427 ntBASIC4.59□□□□□ -1.67
COPAP53621 GDI2P1-201ENST00000429312 1336 ntBASIC4.59□□□□□ -1.67
COPAP53621 RPS29P17-201ENST00000430795 166 ntBASIC4.59□□□□□ -1.67
COPAP53621 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.59□□□□□ -1.67
COPAP53621 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.59□□□□□ -1.67
COPAP53621 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.59□□□□□ -1.67
COPAP53621 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.59□□□□□ -1.67
COPAP53621 SNRPEP7-201ENST00000438350 220 ntBASIC4.59□□□□□ -1.67
COPAP53621 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.59□□□□□ -1.67
COPAP53621 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 RNU7-136P-201ENST00000458819 69 ntBASIC4.59□□□□□ -1.67
COPAP53621 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.59□□□□□ -1.67
COPAP53621 RPS26P28-201ENST00000470806 348 ntBASIC4.59□□□□□ -1.67
COPAP53621 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.59□□□□□ -1.67
COPAP53621 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.59□□□□□ -1.67
COPAP53621 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.59□□□□□ -1.67
COPAP53621 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.59□□□□□ -1.67
COPAP53621 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.59□□□□□ -1.67
COPAP53621 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
COPAP53621 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.59□□□□□ -1.67
COPAP53621 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 AP000873.5-201ENST00000533906 236 ntBASIC4.59□□□□□ -1.67
COPAP53621 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.59□□□□□ -1.67
COPAP53621 MTND6P33-201ENST00000571794 183 ntBASIC4.59□□□□□ -1.67
COPAP53621 AL121834.1-201ENST00000572284 509 ntBASIC4.59□□□□□ -1.67
COPAP53621 AC136618.2-201ENST00000575091 400 ntBASIC4.59□□□□□ -1.67
COPAP53621 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.59□□□□□ -1.67
COPAP53621 AL139286.1-201ENST00000604465 483 ntBASIC4.59□□□□□ -1.67
COPAP53621 AC128687.1-201ENST00000605304 619 ntBASIC4.59□□□□□ -1.67
COPAP53621 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.59□□□□□ -1.67
COPAP53621 AC114781.5-201ENST00000615297 108 ntBASIC4.59□□□□□ -1.67
COPAP53621 AC009318.4-201ENST00000620496 486 ntBASIC4.59□□□□□ -1.67
COPAP53621 MIR7154-201ENST00000620673 73 ntBASIC4.59□□□□□ -1.67
COPAP53621 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.59□□□□□ -1.67
COPAP53621 CYP3A51P-201ENST00000633513 256 ntBASIC4.59□□□□□ -1.67
COPAP53621 MIR4496-201ENST00000635896 61 ntBASIC4.59□□□□□ -1.67
COPAP53621 AL391684.1-202ENST00000641293 1636 ntBASIC4.59□□□□□ -1.67
COPAP53621 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
COPAP53621 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COPAP53621 AL031985.3-201ENST00000565390 2449 ntBASIC4.58□□□□□ -1.68
COPAP53621 AC008725.1-201ENST00000605123 2263 ntBASIC4.58□□□□□ -1.68
COPAP53621 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.58□□□□□ -1.68
COPAP53621 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COPAP53621 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.58□□□□□ -1.68
COPAP53621 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 MTND4P16-201ENST00000466108 1367 ntBASIC4.58□□□□□ -1.68
COPAP53621 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.58□□□□□ -1.68
COPAP53621 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 RNU4-21P-201ENST00000362802 126 ntBASIC4.58□□□□□ -1.68
COPAP53621 RNU1-130P-201ENST00000363930 160 ntBASIC4.58□□□□□ -1.68
COPAP53621 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 Y_RNA.559-201ENST00000384686 107 ntBASIC4.58□□□□□ -1.68
COPAP53621 DHFRP6-201ENST00000401776 268 ntBASIC4.58□□□□□ -1.68
COPAP53621 RN7SKP142-201ENST00000411236 328 ntBASIC4.58□□□□□ -1.68
COPAP53621 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.58□□□□□ -1.68
COPAP53621 HMGB1P11-201ENST00000413899 637 ntBASIC4.58□□□□□ -1.68
COPAP53621 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.58□□□□□ -1.68
COPAP53621 OR51AB1P-201ENST00000429046 620 ntBASIC4.58□□□□□ -1.68
COPAP53621 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.58□□□□□ -1.68
COPAP53621 DLGAP5P1-201ENST00000430307 464 ntBASIC4.58□□□□□ -1.68
COPAP53621 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.58□□□□□ -1.68
COPAP53621 AL356276.2-201ENST00000435919 558 ntBASIC4.58□□□□□ -1.68
COPAP53621 AL353706.1-201ENST00000436728 494 ntBASIC4.58□□□□□ -1.68
COPAP53621 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.58□□□□□ -1.68
COPAP53621 ARPC3P5-201ENST00000448802 534 ntBASIC4.58□□□□□ -1.68
COPAP53621 RNU6-956P-201ENST00000458868 103 ntBASIC4.58□□□□□ -1.68
COPAP53621 RPL37P6-202ENST00000464216 403 ntBASIC4.58□□□□□ -1.68
COPAP53621 RN7SL303P-201ENST00000469773 251 ntBASIC4.58□□□□□ -1.68
COPAP53621 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
COPAP53621 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.58□□□□□ -1.68
COPAP53621 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.58□□□□□ -1.68
COPAP53621 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.58□□□□□ -1.68
COPAP53621 IGLVIV-53-201ENST00000520107 367 ntBASIC4.58□□□□□ -1.68
COPAP53621 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.58□□□□□ -1.68
COPAP53621 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.58□□□□□ -1.68
COPAP53621 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 VN1R79P-201ENST00000593540 513 ntBASIC4.58□□□□□ -1.68
COPAP53621 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
COPAP53621 AC025588.3-201ENST00000604182 274 ntBASIC4.58□□□□□ -1.68
COPAP53621 AL009028.1-201ENST00000604895 802 ntBASIC4.58□□□□□ -1.68
COPAP53621 AL139286.2-201ENST00000606838 396 ntBASIC4.58□□□□□ -1.68
COPAP53621 AC103591.3-201ENST00000608684 209 ntBASIC4.58□□□□□ -1.68
COPAP53621 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.58□□□□□ -1.68
COPAP53621 AC009878.1-201ENST00000621819 340 ntBASIC4.58□□□□□ -1.68
COPAP53621 AL359715.5-201ENST00000623431 443 ntBASIC4.58□□□□□ -1.68
COPAP53621 AC092656.1-203ENST00000624134 423 ntBASIC4.58□□□□□ -1.68
COPAP53621 AC068724.3-201ENST00000625906 87 ntBASIC4.58□□□□□ -1.68
COPAP53621 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms