Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.62□□□□□ -1.67
NEK3P51956 AC034159.1-201ENST00000513885 583 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.62□□□□□ -1.67
NEK3P51956 RNU6-759P-201ENST00000516740 103 ntBASIC4.62□□□□□ -1.67
NEK3P51956 RNU6-714P-201ENST00000516963 103 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.62□□□□□ -1.67
NEK3P51956 AC106038.2-201ENST00000520706 568 ntBASIC4.62□□□□□ -1.67
NEK3P51956 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.62□□□□□ -1.67
NEK3P51956 AP004242.1-201ENST00000533701 349 ntBASIC4.62□□□□□ -1.67
NEK3P51956 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.62□□□□□ -1.67
NEK3P51956 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.62□□□□□ -1.67
NEK3P51956 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.62□□□□□ -1.67
NEK3P51956 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.62□□□□□ -1.67
NEK3P51956 PSMB7P1-201ENST00000556349 514 ntBASIC4.62□□□□□ -1.67
NEK3P51956 MTND6P33-201ENST00000571794 183 ntBASIC4.62□□□□□ -1.67
NEK3P51956 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.62□□□□□ -1.67
NEK3P51956 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NEK3P51956 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
NEK3P51956 AC008759.1-201ENST00000589783 983 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AC013444.2-201ENST00000603317 787 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AP002360.3-201ENST00000607673 710 ntBASIC4.62□□□□□ -1.67
NEK3P51956 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.62□□□□□ -1.67
NEK3P51956 AC008443.7-201ENST00000622195 246 ntBASIC4.62□□□□□ -1.67
NEK3P51956 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.62□□□□□ -1.67
NEK3P51956 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.62□□□□□ -1.67
NEK3P51956 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.62□□□□□ -1.67
NEK3P51956 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NEK3P51956 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.62□□□□□ -1.67
NEK3P51956 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
NEK3P51956 AC135352.1-201ENST00000506173 1418 ntBASIC4.62□□□□□ -1.67
NEK3P51956 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEK3P51956 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.62□□□□□ -1.67
NEK3P51956 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.62□□□□□ -1.67
NEK3P51956 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 AC087190.4-201ENST00000574616 8334 ntBASIC4.61□□□□□ -1.67
NEK3P51956 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NEK3P51956 AL133243.3-201ENST00000617415 3004 ntBASIC4.61□□□□□ -1.67
NEK3P51956 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.61□□□□□ -1.67
NEK3P51956 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 MIR607-201ENST00000385241 96 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AL356421.1-201ENST00000403255 413 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AL138880.1-201ENST00000405824 642 ntBASIC4.61□□□□□ -1.67
NEK3P51956 RNU6-920P-201ENST00000410926 92 ntBASIC4.61□□□□□ -1.67
NEK3P51956 ELOCP19-201ENST00000411919 318 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC092447.6-201ENST00000414578 210 ntBASIC4.61□□□□□ -1.67
NEK3P51956 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.61□□□□□ -1.67
NEK3P51956 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 RSU1P2-202ENST00000437884 485 ntBASIC4.61□□□□□ -1.67
NEK3P51956 LSM1P1-201ENST00000438629 273 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AL117351.1-201ENST00000438864 766 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC108734.1-201ENST00000439549 399 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.61□□□□□ -1.67
NEK3P51956 RPS24P6-201ENST00000452670 400 ntBASIC4.61□□□□□ -1.67
NEK3P51956 RPS26P28-201ENST00000470806 348 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC012158.1-204ENST00000483430 465 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC013356.1-201ENST00000489027 564 ntBASIC4.61□□□□□ -1.67
NEK3P51956 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 AC092045.1-201ENST00000495716 1231 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.61□□□□□ -1.67
NEK3P51956 AC015795.1-201ENST00000513669 327 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.61□□□□□ -1.67
NEK3P51956 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.61□□□□□ -1.67
NEK3P51956 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.61□□□□□ -1.67
NEK3P51956 CR383656.7-201ENST00000548164 174 ntBASIC4.61□□□□□ -1.67
NEK3P51956 SETP2-201ENST00000553886 926 ntBASIC4.61□□□□□ -1.67
NEK3P51956 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NEK3P51956 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 AL031176.1-201ENST00000604554 466 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC008966.2-201ENST00000606157 453 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC097468.3-201ENST00000607956 456 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AL158196.1-201ENST00000616786 434 ntBASIC4.61□□□□□ -1.67
NEK3P51956 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NEK3P51956 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.61□□□□□ -1.67
NEK3P51956 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEK3P51956 MFSD8-242ENST00000641690 4199 ntBASIC4.61□□□□□ -1.67
NEK3P51956 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.6□□□□□ -1.67
NEK3P51956 AC139713.2-214ENST00000642059 1811 ntBASIC4.6□□□□□ -1.67
NEK3P51956 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.6□□□□□ -1.67
NEK3P51956 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
NEK3P51956 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 AC016588.2-201ENST00000632484 3021 ntBASIC4.6□□□□□ -1.67
NEK3P51956 RAD17P1-201ENST00000418130 2042 ntBASIC4.6□□□□□ -1.67
NEK3P51956 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
NEK3P51956 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEK3P51956 RNA5SP52-201ENST00000362448 134 ntBASIC4.6□□□□□ -1.67
NEK3P51956 RNU6-97P-201ENST00000363387 104 ntBASIC4.6□□□□□ -1.67
NEK3P51956 RNA5SP447-201ENST00000363749 119 ntBASIC4.6□□□□□ -1.67
NEK3P51956 RNU6-501P-201ENST00000364072 100 ntBASIC4.6□□□□□ -1.67
NEK3P51956 RNU6-660P-201ENST00000364566 109 ntBASIC4.6□□□□□ -1.67
NEK3P51956 Y_RNA.560-201ENST00000384689 102 ntBASIC4.6□□□□□ -1.67
NEK3P51956 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms