Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
BRCA2P51587 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
BRCA2P51587 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
BRCA2P51587 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
BRCA2P51587 AL512646.1-201ENST00000269395 1077 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
BRCA2P51587 RNU1-89P-201ENST00000384592 164 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.72□□□□□ -1.97
BRCA2P51587 BTG3P1-201ENST00000435859 716 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.72□□□□□ -1.97
BRCA2P51587 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.72□□□□□ -1.97
BRCA2P51587 AP001521.1-201ENST00000609150 300 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 AC090115.4-201ENST00000609970 188 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 AC244517.3-201ENST00000616254 1235 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 MIR6873-201ENST00000622788 63 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
BRCA2P51587 AP000526.1-201ENST00000603308 1388 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
BRCA2P51587 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
BRCA2P51587 MTCO3P11-201ENST00000455103 774 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 RN7SL633P-201ENST00000488974 297 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 NIPA2P2-201ENST00000496376 1083 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
BRCA2P51587 AP003385.6-201ENST00000531603 374 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 GNAI2P1-201ENST00000541815 315 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 AC008083.2-201ENST00000546707 476 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 AC020895.1-201ENST00000595362 272 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
BRCA2P51587 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
BRCA2P51587 RALGAPA1P1-201ENST00000443361 6232 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.71□□□□□ -1.97
BRCA2P51587 FAM60DP-201ENST00000524174 632 ntBASIC2.71□□□□□ -1.97
BRCA2P51587 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.71□□□□□ -1.97
BRCA2P51587 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.71□□□□□ -1.97
BRCA2P51587 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
BRCA2P51587 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.71□□□□□ -1.98
BRCA2P51587 OR1AB1P-201ENST00000585564 761 ntBASIC2.71□□□□□ -1.98
BRCA2P51587 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.71□□□□□ -1.98
BRCA2P51587 AC110994.2-201ENST00000635481 492 ntBASIC2.71□□□□□ -1.98
BRCA2P51587 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
BRCA2P51587 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.71□□□□□ -1.98
BRCA2P51587 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.71□□□□□ -1.98
BRCA2P51587 EI24P2-201ENST00000397776 1076 ntBASIC2.71□□□□□ -1.98
BRCA2P51587 RN7SKP32-201ENST00000410167 303 ntBASIC2.71□□□□□ -1.98
BRCA2P51587 AC069218.2-201ENST00000411665 344 ntBASIC2.71□□□□□ -1.98
BRCA2P51587 FABP5P12-201ENST00000515543 389 ntBASIC2.71□□□□□ -1.98
BRCA2P51587 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.71□□□□□ -1.98
BRCA2P51587 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.71□□□□□ -1.98
BRCA2P51587 AC069528.2-201ENST00000624849 1991 ntBASIC2.71□□□□□ -1.98
BRCA2P51587 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.7□□□□□ -1.98
BRCA2P51587 AC092045.1-201ENST00000495716 1231 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 AC067747.1-201ENST00000608026 250 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
BRCA2P51587 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BRCA2P51587 AL136964.1-201ENST00000622038 2990 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 AC006960.1-201ENST00000419980 153 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 Z82205.1-201ENST00000428456 297 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 AC108667.1-201ENST00000428618 249 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.7□□□□□ -1.98
BRCA2P51587 AC011753.1-201ENST00000451001 220 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
BRCA2P51587 AC021733.2-201ENST00000518830 497 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 AL360085.1-201ENST00000604713 532 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 AL359715.5-201ENST00000623431 443 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
BRCA2P51587 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
BRCA2P51587 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
BRCA2P51587 AC138915.3-201ENST00000562908 1389 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BRCA2P51587 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
BRCA2P51587 NPM1P49-201ENST00000448027 714 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.7□□□□□ -1.98
BRCA2P51587 RNU6-295P-201ENST00000516901 104 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BRCA2P51587 AP000790.1-201ENST00000528891 737 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 AC026464.5-201ENST00000562497 722 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.7□□□□□ -1.98
BRCA2P51587 CRYM-AS1-204ENST00000637983 556 ntBASIC2.7□□□□□ -1.98
BRCA2P51587 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BRCA2P51587 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BRCA2P51587 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
BRCA2P51587 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA2P51587 RNA5SP274-201ENST00000410484 108 ntBASIC2.69□□□□□ -1.98
BRCA2P51587 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA2P51587 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.69□□□□□ -1.98
BRCA2P51587 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA2P51587 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA2P51587 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA2P51587 AC093831.2-201ENST00000624393 3427 ntBASIC2.69□□□□□ -1.98
BRCA2P51587 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
BRCA2P51587 Z73965.1-201ENST00000623412 2297 ntBASIC2.69□□□□□ -1.98
BRCA2P51587 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.68□□□□□ -1.98
BRCA2P51587 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
BRCA2P51587 RNU6-582P-201ENST00000362989 107 ntBASIC2.68□□□□□ -1.98
BRCA2P51587 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.68□□□□□ -1.98
BRCA2P51587 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.68□□□□□ -1.98
BRCA2P51587 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.68□□□□□ -1.98
BRCA2P51587 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
BRCA2P51587 OR52B1P-201ENST00000316506 909 ntBASIC2.68□□□□□ -1.98
BRCA2P51587 RPS12P23-201ENST00000419579 400 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms