Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL12P48061 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL12P48061 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.09□□□□□ -1.92
CXCL12P48061 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CXCL12P48061 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CXCL12P48061 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL12P48061 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL12P48061 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL12P48061 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CXCL12P48061 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.08□□□□□ -1.92
CXCL12P48061 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.08□□□□□ -1.92
CXCL12P48061 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL12P48061 RNU6-252P-201ENST00000363232 107 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 MIR124-3-201ENST00000384866 87 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 SNORD67-201ENST00000390833 111 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CXCL12P48061 AL139095.1-201ENST00000404326 391 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 RNU2-17P-201ENST00000410290 190 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.08□□□□□ -1.92
CXCL12P48061 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.08□□□□□ -1.92
CXCL12P48061 ETF1P3-201ENST00000430422 1160 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AL365396.1-201ENST00000430854 671 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 RPS24P8-201ENST00000431490 402 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AF228730.2-201ENST00000438784 848 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 Z99127.3-201ENST00000448158 395 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 RPL23AP23-201ENST00000452590 471 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL12P48061 TVP23BP2-201ENST00000455082 615 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL12P48061 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.08□□□□□ -1.92
CXCL12P48061 AC111000.2-201ENST00000507775 550 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 SCGB1D5P-201ENST00000515134 247 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 RN7SKP132-201ENST00000516001 208 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 CIR1P1-201ENST00000524055 1133 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.08□□□□□ -1.92
CXCL12P48061 AC025918.2-201ENST00000558683 763 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 MIR5047-201ENST00000579212 100 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AC115085.1-201ENST00000588924 229 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.08□□□□□ -1.92
CXCL12P48061 ABI1P1-201ENST00000603375 1120 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AC009948.4-201ENST00000604692 675 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AP006248.3-201ENST00000623580 594 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AL359757.2-201ENST00000624309 274 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AC010149.2-201ENST00000637608 315 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AC139713.2-210ENST00000641741 992 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL12P48061 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL12P48061 AL353743.4-201ENST00000422653 1547 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 AL359693.1-201ENST00000614959 2407 ntBASIC3.08□□□□□ -1.92
CXCL12P48061 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL12P48061 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL12P48061 RNU4-82P-201ENST00000362443 140 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 RNU1-89P-201ENST00000384592 164 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 HMGB1P13-201ENST00000406019 642 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 RPL31P52-201ENST00000407532 367 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 RPS12P23-201ENST00000419579 400 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL12P48061 SLC31A1P1-201ENST00000451221 567 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 MRPS31P2-201ENST00000451581 518 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 AC078785.3-201ENST00000476607 425 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL12P48061 AC011037.1-201ENST00000483964 558 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
CXCL12P48061 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL12P48061 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.07□□□□□ -1.92
CXCL12P48061 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.07□□□□□ -1.92
CXCL12P48061 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL12P48061 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL12P48061 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL12P48061 AL121576.1-201ENST00000556055 276 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.07□□□□□ -1.92
CXCL12P48061 HMGB1P6-201ENST00000569046 646 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 MIR4738-201ENST00000579134 87 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 AC138761.3-201ENST00000579993 334 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL12P48061 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL12P48061 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL12P48061 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.07□□□□□ -1.92
CXCL12P48061 ATP1B3P1-201ENST00000605365 821 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL12P48061 AL355816.1-201ENST00000607951 118 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 AC123768.4-201ENST00000616244 701 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL12P48061 AP003072.4-201ENST00000624580 310 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 FRG1DP-201ENST00000635586 771 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 U6.98-201ENST00000637157 84 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL12P48061 PWAR6-201ENST00000552334 4618 ntBASIC3.07□□□□□ -1.92
CXCL12P48061 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL12P48061 RNA5SP167-201ENST00000365461 116 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 RNU6-98P-201ENST00000384173 107 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 RNU6-1005P-201ENST00000384519 107 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 RNU6-851P-201ENST00000384565 107 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL12P48061 HMGB1P10-201ENST00000395823 563 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 NUP35P1-201ENST00000422734 947 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.06□□□□□ -1.92
CXCL12P48061 RPL21P40-201ENST00000428586 483 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL12P48061 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms