Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFSF9P41273 AC008565.1-201ENST00000509046 885 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF9P41273 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFSF9P41273 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFSF9P41273 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.32□□□□□ -1.88
TNFSF9P41273 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFSF9P41273 AC025918.2-201ENST00000558683 763 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.32□□□□□ -1.88
TNFSF9P41273 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFSF9P41273 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFSF9P41273 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFSF9P41273 MIR4278-201ENST00000636094 69 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 AC083865.1-201ENST00000636634 831 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 OR5BR1P-201ENST00000524992 1330 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TNFSF9P41273 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF9P41273 SRP72P2-201ENST00000344851 1979 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 AC004972.1-201ENST00000623934 2209 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFSF9P41273 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 ZNF807-201ENST00000328088 1707 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 ELL2P4-201ENST00000446870 1376 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFSF9P41273 MIR22-201ENST00000362190 85 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 RNU6-252P-201ENST00000363232 107 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF9P41273 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFSF9P41273 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF9P41273 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 YWHAZP8-201ENST00000436935 731 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 UBE2V1P5-201ENST00000440070 405 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 HMGN2P7-201ENST00000456186 273 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 S100A11P2-201ENST00000467589 312 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 RPL27AP5-201ENST00000469428 449 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 ST13P14-201ENST00000474095 734 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 AP001086.1-201ENST00000494882 321 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF9P41273 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF9P41273 AC005921.1-201ENST00000510589 286 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 RN7SKP289-201ENST00000517244 295 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF9P41273 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.31□□□□□ -1.88
TNFSF9P41273 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF9P41273 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFSF9P41273 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFSF9P41273 AC110741.2-201ENST00000605278 268 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 AC024595.1-201ENST00000623088 387 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 AC006386.2-201ENST00000624491 75 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 AC012005.1-201ENST00000624575 75 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 AL590396.2-201ENST00000636511 1041 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFSF9P41273 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF9P41273 AC107081.3-201ENST00000612715 2034 ntBASIC3.31□□□□□ -1.88
TNFSF9P41273 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF9P41273 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TNFSF9P41273 AL157700.1-201ENST00000561973 1432 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF9P41273 SEPT7P7-201ENST00000420492 1301 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AL512646.1-201ENST00000269395 1077 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF9P41273 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF9P41273 RNU6-543P-201ENST00000362576 108 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 SNORA71.1-201ENST00000364523 117 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 RPL7P25-201ENST00000404151 721 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AL138885.1-201ENST00000405921 675 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 RNU2-37P-201ENST00000410695 177 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 TATDN1P1-201ENST00000414123 891 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF9P41273 AC245291.1-201ENST00000419501 328 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 PTP4A1P5-201ENST00000420305 455 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFSF9P41273 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFSF9P41273 PTP4A1P3-201ENST00000433661 420 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 Z77249.1-201ENST00000444622 1175 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF9P41273 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF9P41273 AC117440.1-201ENST00000474107 571 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 NDUFB4P9-201ENST00000511646 388 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AC090136.1-201ENST00000520009 240 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.3□□□□□ -1.88
TNFSF9P41273 OR5D17P-201ENST00000531492 978 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF9P41273 EIF4BP1-201ENST00000554881 351 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 MIR4504-201ENST00000577413 92 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF9P41273 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF9P41273 BNIP3P11-201ENST00000603878 563 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AC135178.6-201ENST00000605314 398 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AC079791.1-201ENST00000605356 973 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AC004775.1-201ENST00000607389 753 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms