Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.87□□□□□ -1.79
HNF4AP41235 OR4A12P-201ENST00000530847 918 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 LRRC6P1-201ENST00000532188 885 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AC091516.1-201ENST00000549191 703 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AC008127.2-201ENST00000549925 1075 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AC009097.3-201ENST00000563557 1018 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 SNORD84-203ENST00000584275 78 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.87□□□□□ -1.79
HNF4AP41235 AC025811.1-201ENST00000604312 472 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 MIR6867-201ENST00000610636 67 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 MIR486-1-201ENST00000612171 68 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AC008083.4-201ENST00000615076 444 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AL391261.4-201ENST00000616012 481 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 XIST_intron.1-201ENST00000619444 68 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 Z99129.2-201ENST00000619967 314 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.87□□□□□ -1.79
HNF4AP41235 AC040168.1-201ENST00000623594 991 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 AC112484.5-201ENST00000624189 228 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.87□□□□□ -1.79
HNF4AP41235 GDI2P1-201ENST00000429312 1336 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 IPO8P1-201ENST00000455509 3109 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 RLIMP1-201ENST00000339626 1680 ntBASIC3.87□□□□□ -1.79
HNF4AP41235 PRO1804-201ENST00000623780 2050 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HNF4AP41235 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.86□□□□□ -1.79
HNF4AP41235 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
HNF4AP41235 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.86□□□□□ -1.79
HNF4AP41235 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 Y_RNA.472-201ENST00000384322 102 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 RNA5SP317-201ENST00000410176 116 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 RNA5SP311-201ENST00000411290 116 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 RAB28P1-201ENST00000411517 641 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 RPL7AP73-201ENST00000413490 353 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 BTF3P8-201ENST00000414577 526 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 AC005005.2-201ENST00000420779 380 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 MTCO3P1-205ENST00000422088 832 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.86□□□□□ -1.79
HNF4AP41235 HIGD1AP4-201ENST00000430194 280 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC087650.1-201ENST00000431445 468 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC091390.1-201ENST00000433904 331 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 KCTD9P3-201ENST00000434597 1169 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC114755.5-201ENST00000447760 831 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.86□□□□□ -1.79
HNF4AP41235 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 NECAP1P2-201ENST00000455668 727 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC069499.1-201ENST00000489433 509 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 KLRA1P-201ENST00000503499 986 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC092593.2-201ENST00000513866 913 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 RNA5SP315-201ENST00000516340 116 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 RNA5SP312-201ENST00000517068 116 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 NARSP2-201ENST00000518524 679 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 IGKV2-23-201ENST00000518729 323 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.86□□□□□ -1.79
HNF4AP41235 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.86□□□□□ -1.79
HNF4AP41235 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.86□□□□□ -1.79
HNF4AP41235 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC245036.5-201ENST00000596330 847 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 AC124312.4-201ENST00000605533 310 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 RNU4-89P-201ENST00000607443 133 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.86□□□□□ -1.79
HNF4AP41235 AC099676.1-201ENST00000608886 657 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 MIR6868-201ENST00000611215 58 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.86□□□□□ -1.79
HNF4AP41235 AL591424.2-201ENST00000617023 128 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC018755.4-201ENST00000619715 454 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AL139089.1-201ENST00000620372 975 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 AC068057.2-201ENST00000624047 895 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 CU459211.1-201ENST00000635667 749 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
HNF4AP41235 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 AC099786.3-201ENST00000565735 1410 ntBASIC3.86□□□□□ -1.79
HNF4AP41235 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HNF4AP41235 AC024560.2-201ENST00000507981 1497 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms