Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC090425.2-201ENST00000608818 501 ntBASIC3.12□□□□□ -1.91
RFC3P40938 AL163051.2-201ENST00000618976 735 ntBASIC3.12□□□□□ -1.91
RFC3P40938 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RFC3P40938 PLCE1P1-201ENST00000622094 305 ntBASIC3.12□□□□□ -1.91
RFC3P40938 AP001002.2-201ENST00000625137 386 ntBASIC3.12□□□□□ -1.91
RFC3P40938 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.12□□□□□ -1.91
RFC3P40938 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.11□□□□□ -1.91
RFC3P40938 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC3P40938 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC3P40938 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC3P40938 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFC3P40938 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
RFC3P40938 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC3P40938 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.11□□□□□ -1.91
RFC3P40938 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RFC3P40938 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RFC3P40938 RNU6-600P-201ENST00000362524 99 ntBASIC3.11□□□□□ -1.91
RFC3P40938 SNORA51.2-201ENST00000364595 132 ntBASIC3.11□□□□□ -1.91
RFC3P40938 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC3P40938 MIR591-201ENST00000385290 95 ntBASIC3.11□□□□□ -1.91
RFC3P40938 RPL17P50-201ENST00000396131 546 ntBASIC3.11□□□□□ -1.91
RFC3P40938 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC3P40938 SFR1P1-201ENST00000403720 688 ntBASIC3.11□□□□□ -1.91
RFC3P40938 AL138880.1-201ENST00000405824 642 ntBASIC3.11□□□□□ -1.91
RFC3P40938 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC3P40938 RPS20P25-201ENST00000412447 352 ntBASIC3.11□□□□□ -1.91
RFC3P40938 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC3P40938 RPS3AP9-201ENST00000417027 792 ntBASIC3.11□□□□□ -1.91
RFC3P40938 AL513174.1-201ENST00000423182 629 ntBASIC3.11□□□□□ -1.91
RFC3P40938 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.11□□□□□ -1.91
RFC3P40938 SETP5-201ENST00000437270 562 ntBASIC3.11□□□□□ -1.91
RFC3P40938 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC3P40938 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC3P40938 BX248409.1-201ENST00000455497 255 ntBASIC3.11□□□□□ -1.91
RFC3P40938 RN7SL594P-201ENST00000470590 287 ntBASIC3.11□□□□□ -1.91
RFC3P40938 RPS27P23-201ENST00000487608 251 ntBASIC3.11□□□□□ -1.91
RFC3P40938 RNU6-202P-201ENST00000515998 96 ntBASIC3.11□□□□□ -1.91
RFC3P40938 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC3P40938 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
RFC3P40938 MIR4276-201ENST00000584832 70 ntBASIC3.11□□□□□ -1.91
RFC3P40938 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC3P40938 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC3P40938 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.11□□□□□ -1.91
RFC3P40938 VN1R88P-201ENST00000596787 292 ntBASIC3.11□□□□□ -1.91
RFC3P40938 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.11□□□□□ -1.91
RFC3P40938 AC012467.1-201ENST00000607740 256 ntBASIC3.11□□□□□ -1.91
RFC3P40938 MIR7112-201ENST00000616126 65 ntBASIC3.11□□□□□ -1.91
RFC3P40938 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.11□□□□□ -1.91
RFC3P40938 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC3P40938 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.11□□□□□ -1.91
RFC3P40938 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RFC3P40938 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFC3P40938 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC3P40938 AC007256.1-201ENST00000392253 2765 ntBASIC3.11□□□□□ -1.91
RFC3P40938 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC3P40938 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
RFC3P40938 AC024341.1-201ENST00000526444 1552 ntBASIC3.1□□□□□ -1.91
RFC3P40938 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RFC3P40938 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RFC3P40938 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFC3P40938 SNORA38.1-201ENST00000364172 131 ntBASIC3.1□□□□□ -1.91
RFC3P40938 SKINT1L-201ENST00000401057 817 ntBASIC3.1□□□□□ -1.91
RFC3P40938 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC3P40938 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.1□□□□□ -1.91
RFC3P40938 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.1□□□□□ -1.91
RFC3P40938 GTF2IP23-201ENST00000423746 351 ntBASIC3.1□□□□□ -1.91
RFC3P40938 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.1□□□□□ -1.91
RFC3P40938 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.1□□□□□ -1.91
RFC3P40938 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
RFC3P40938 CYCSP32-201ENST00000440548 321 ntBASIC3.1□□□□□ -1.91
RFC3P40938 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFC3P40938 AC115115.1-201ENST00000449927 248 ntBASIC3.1□□□□□ -1.91
RFC3P40938 SLC31A1P1-201ENST00000451221 567 ntBASIC3.1□□□□□ -1.91
RFC3P40938 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC3P40938 NF1P3-201ENST00000457709 450 ntBASIC3.1□□□□□ -1.91
RFC3P40938 snoU13.24-201ENST00000458998 104 ntBASIC3.1□□□□□ -1.91
RFC3P40938 RPL5P24-201ENST00000463742 885 ntBASIC3.1□□□□□ -1.91
RFC3P40938 VN1R17P-201ENST00000472048 1090 ntBASIC3.1□□□□□ -1.91
RFC3P40938 SYPL1P1-201ENST00000473622 768 ntBASIC3.1□□□□□ -1.91
RFC3P40938 RPS4XP13-201ENST00000483219 789 ntBASIC3.1□□□□□ -1.91
RFC3P40938 RPL7P38-201ENST00000488396 739 ntBASIC3.1□□□□□ -1.91
RFC3P40938 HMGB3P14-201ENST00000494195 599 ntBASIC3.1□□□□□ -1.91
RFC3P40938 AC114967.1-201ENST00000504890 259 ntBASIC3.1□□□□□ -1.91
RFC3P40938 FCF1P8-201ENST00000510322 597 ntBASIC3.1□□□□□ -1.91
RFC3P40938 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.1□□□□□ -1.91
RFC3P40938 AC068657.1-201ENST00000520807 306 ntBASIC3.1□□□□□ -1.91
RFC3P40938 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.1□□□□□ -1.91
RFC3P40938 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFC3P40938 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFC3P40938 CR383656.14-201ENST00000551951 406 ntBASIC3.1□□□□□ -1.91
RFC3P40938 DUXAP6-201ENST00000553858 601 ntBASIC3.1□□□□□ -1.91
RFC3P40938 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.1□□□□□ -1.91
RFC3P40938 AL606834.2-201ENST00000602954 668 ntBASIC3.1□□□□□ -1.91
RFC3P40938 AC011468.4-201ENST00000603942 409 ntBASIC3.1□□□□□ -1.91
RFC3P40938 AL365400.2-201ENST00000605604 902 ntBASIC3.1□□□□□ -1.91
RFC3P40938 AC021851.1-201ENST00000608537 1082 ntBASIC3.1□□□□□ -1.91
RFC3P40938 AC096586.1-201ENST00000610267 561 ntBASIC3.1□□□□□ -1.91
RFC3P40938 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.1□□□□□ -1.91
RFC3P40938 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC3P40938 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms