Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 U6.98-201ENST00000637157 84 ntBASIC4.16□□□□□ -1.74
USP8P40818 AC026951.1-201ENST00000559530 2459 ntBASIC4.16□□□□□ -1.74
USP8P40818 AC109315.1-201ENST00000584143 1347 ntBASIC4.16□□□□□ -1.74
USP8P40818 AC096656.1-201ENST00000623826 1364 ntBASIC4.15□□□□□ -1.74
USP8P40818 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USP8P40818 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
USP8P40818 AF127577.6-201ENST00000623352 2191 ntBASIC4.15□□□□□ -1.75
USP8P40818 HMGB1P5-201ENST00000255320 642 ntBASIC4.15□□□□□ -1.75
USP8P40818 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
USP8P40818 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP8P40818 RNU6-619P-201ENST00000365146 108 ntBASIC4.15□□□□□ -1.75
USP8P40818 RNU6-157P-201ENST00000383957 107 ntBASIC4.15□□□□□ -1.75
USP8P40818 RNU1-13P-201ENST00000384499 162 ntBASIC4.15□□□□□ -1.75
USP8P40818 ATP5F1P3-201ENST00000397213 657 ntBASIC4.15□□□□□ -1.75
USP8P40818 ATP5F1P4-201ENST00000397288 746 ntBASIC4.15□□□□□ -1.75
USP8P40818 AL590704.1-201ENST00000402856 794 ntBASIC4.15□□□□□ -1.75
USP8P40818 RNU6-757P-201ENST00000410334 100 ntBASIC4.15□□□□□ -1.75
USP8P40818 RNA5SP80-201ENST00000410475 111 ntBASIC4.15□□□□□ -1.75
USP8P40818 AL161449.1-201ENST00000414531 1199 ntBASIC4.15□□□□□ -1.75
USP8P40818 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.15□□□□□ -1.75
USP8P40818 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.15□□□□□ -1.75
USP8P40818 DPRXP1-201ENST00000426312 460 ntBASIC4.15□□□□□ -1.75
USP8P40818 OR4C10P-201ENST00000434991 931 ntBASIC4.15□□□□□ -1.75
USP8P40818 MTND3P1-201ENST00000441336 220 ntBASIC4.15□□□□□ -1.75
USP8P40818 RPL21P134-201ENST00000453468 483 ntBASIC4.15□□□□□ -1.75
USP8P40818 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP8P40818 AC010468.1-201ENST00000461022 817 ntBASIC4.15□□□□□ -1.75
USP8P40818 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.15□□□□□ -1.75
USP8P40818 AC006511.1-201ENST00000470614 315 ntBASIC4.15□□□□□ -1.75
USP8P40818 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.15□□□□□ -1.75
USP8P40818 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.15□□□□□ -1.75
USP8P40818 FTH1P21-201ENST00000512179 511 ntBASIC4.15□□□□□ -1.75
USP8P40818 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.15□□□□□ -1.75
USP8P40818 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.15□□□□□ -1.75
USP8P40818 COX6B1P6-201ENST00000522347 255 ntBASIC4.15□□□□□ -1.75
USP8P40818 AP003461.1-201ENST00000528866 78 ntBASIC4.15□□□□□ -1.75
USP8P40818 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP8P40818 AL442163.2-201ENST00000553912 710 ntBASIC4.15□□□□□ -1.75
USP8P40818 AC008015.1-201ENST00000555505 465 ntBASIC4.15□□□□□ -1.75
USP8P40818 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.15□□□□□ -1.75
USP8P40818 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.15□□□□□ -1.75
USP8P40818 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.15□□□□□ -1.75
USP8P40818 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.15□□□□□ -1.75
USP8P40818 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.15□□□□□ -1.75
USP8P40818 AL031281.1-201ENST00000604049 488 ntBASIC4.15□□□□□ -1.75
USP8P40818 AC018638.7-201ENST00000605836 1114 ntBASIC4.15□□□□□ -1.75
USP8P40818 AC131235.4-201ENST00000609288 620 ntBASIC4.15□□□□□ -1.75
USP8P40818 AC243654.2-201ENST00000612843 443 ntBASIC4.15□□□□□ -1.75
USP8P40818 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP8P40818 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.15□□□□□ -1.75
USP8P40818 AP003072.4-201ENST00000624580 310 ntBASIC4.15□□□□□ -1.75
USP8P40818 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.15□□□□□ -1.75
USP8P40818 AP003399.1-201ENST00000637534 361 ntBASIC4.15□□□□□ -1.75
USP8P40818 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.15□□□□□ -1.75
USP8P40818 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
USP8P40818 DCAF13P1-201ENST00000495256 1330 ntBASIC4.15□□□□□ -1.75
USP8P40818 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP8P40818 GABPAP-201ENST00000419271 1356 ntBASIC4.14□□□□□ -1.75
USP8P40818 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP8P40818 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.14□□□□□ -1.75
USP8P40818 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.14□□□□□ -1.75
USP8P40818 RNA5SP283-201ENST00000365604 119 ntBASIC4.14□□□□□ -1.75
USP8P40818 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.14□□□□□ -1.75
USP8P40818 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 AL356131.1-201ENST00000405826 414 ntBASIC4.14□□□□□ -1.75
USP8P40818 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.14□□□□□ -1.75
USP8P40818 RNU6-628P-201ENST00000410675 107 ntBASIC4.14□□□□□ -1.75
USP8P40818 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.14□□□□□ -1.75
USP8P40818 AIMP1P1-201ENST00000418670 937 ntBASIC4.14□□□□□ -1.75
USP8P40818 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.14□□□□□ -1.75
USP8P40818 RPL7P44-201ENST00000424827 742 ntBASIC4.14□□□□□ -1.75
USP8P40818 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP8P40818 RSL24D1P6-201ENST00000426934 401 ntBASIC4.14□□□□□ -1.75
USP8P40818 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 RPS27AP12-201ENST00000429552 465 ntBASIC4.14□□□□□ -1.75
USP8P40818 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.14□□□□□ -1.75
USP8P40818 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 ATP5F1P1-201ENST00000433775 569 ntBASIC4.14□□□□□ -1.75
USP8P40818 SEPT7P5-201ENST00000434048 306 ntBASIC4.14□□□□□ -1.75
USP8P40818 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.14□□□□□ -1.75
USP8P40818 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.14□□□□□ -1.75
USP8P40818 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.14□□□□□ -1.75
USP8P40818 RPL7P59-201ENST00000447700 943 ntBASIC4.14□□□□□ -1.75
USP8P40818 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 RNU7-125P-201ENST00000458760 62 ntBASIC4.14□□□□□ -1.75
USP8P40818 RN7SL385P-201ENST00000468873 276 ntBASIC4.14□□□□□ -1.75
USP8P40818 AL049830.2-201ENST00000480072 201 ntBASIC4.14□□□□□ -1.75
USP8P40818 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.14□□□□□ -1.75
USP8P40818 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.14□□□□□ -1.75
USP8P40818 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.14□□□□□ -1.75
USP8P40818 AC105313.1-201ENST00000509121 353 ntBASIC4.14□□□□□ -1.75
USP8P40818 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.14□□□□□ -1.75
USP8P40818 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.14□□□□□ -1.75
USP8P40818 MTCO1P30-201ENST00000515244 580 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms