Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD13P35453 AC010342.1-201ENST00000514047 877 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 AC022695.1-201ENST00000522089 237 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AC007991.1-201ENST00000522680 631 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HOXD13P35453 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 AC007424.1-203ENST00000554613 687 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 HSPE1P3-201ENST00000559254 309 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AC020914.4-201ENST00000597690 277 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD13P35453 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.18□□□□□ -1.74
HOXD13P35453 AC097478.2-201ENST00000610572 514 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AL354798.1-201ENST00000622505 329 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AC112200.1-201ENST00000625015 234 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD13P35453 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD13P35453 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
HOXD13P35453 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD13P35453 AC005539.1-201ENST00000443768 1479 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 FAM35DP-201ENST00000323387 2712 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AL079343.1-201ENST00000572358 1771 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXD13P35453 RNA5SP258-201ENST00000362750 119 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 RNU6-989P-201ENST00000362756 107 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.17□□□□□ -1.74
HOXD13P35453 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
HOXD13P35453 MIR30B-201ENST00000384850 88 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 HLFP1-201ENST00000402375 499 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AL138880.1-201ENST00000405824 642 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AL592310.1-201ENST00000414330 671 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 SSR1P2-201ENST00000415208 787 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 RPS7P15-201ENST00000415804 584 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 NPM1P49-201ENST00000448027 714 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 USP9YP34-201ENST00000453983 808 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD13P35453 snoU109.4-201ENST00000458953 143 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 SNORD11.1-201ENST00000459482 85 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AC026410.2-201ENST00000460281 156 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD13P35453 RPS15AP17-201ENST00000470598 390 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD13P35453 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 RNU6-583P-201ENST00000516012 92 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 MIR2116-201ENST00000517221 80 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AC008802.1-201ENST00000519121 791 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 SUMO2P20-201ENST00000520803 283 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 MTCYBP41-201ENST00000528913 1123 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXD13P35453 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD13P35453 AC084824.1-201ENST00000550917 1005 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXD13P35453 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD13P35453 MTND4P33-201ENST00000556706 766 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AC009712.1-201ENST00000564938 316 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AC087499.8-201ENST00000578406 226 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD13P35453 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD13P35453 BNIP3P11-201ENST00000603878 563 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AL450336.1-201ENST00000605180 586 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AC128687.1-201ENST00000605304 619 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 HMGB1P50-201ENST00000605814 607 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 RNU1-30P-201ENST00000606575 163 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD13P35453 AC107075.1-201ENST00000613695 314 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AC013470.4-201ENST00000619978 986 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 AC040168.1-201ENST00000623594 991 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HOXD13P35453 AL365440.1-201ENST00000436135 2167 ntBASIC4.17□□□□□ -1.74
HOXD13P35453 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD13P35453 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HOXD13P35453 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD13P35453 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD13P35453 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HOXD13P35453 LINC02471-203ENST00000641941 4752 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD13P35453 RNU6-1249P-201ENST00000363237 111 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 Y_RNA.192-201ENST00000363977 102 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 Y_RNA.311-201ENST00000365068 96 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 MIR607-201ENST00000385241 96 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXD13P35453 HMGN2P8-201ENST00000391458 268 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 RNU2-15P-201ENST00000410692 191 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AC068533.2-201ENST00000411872 306 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD13P35453 HMGB1P49-201ENST00000418882 569 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD13P35453 AL139247.1-201ENST00000422768 325 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms