Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 AC024909.2-201ENST00000553035 286 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.49□□□□□ -1.69
CIITAP33076 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.49□□□□□ -1.69
CIITAP33076 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 MIR4286-201ENST00000580651 93 ntBASIC4.49□□□□□ -1.69
CIITAP33076 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.49□□□□□ -1.69
CIITAP33076 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.49□□□□□ -1.69
CIITAP33076 WISP1-OT1-201ENST00000602893 642 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AL592436.1-201ENST00000605135 558 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AC124312.6-202ENST00000623624 418 ntBASIC4.49□□□□□ -1.69
CIITAP33076 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CIITAP33076 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CIITAP33076 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.49□□□□□ -1.69
CIITAP33076 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CIITAP33076 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CIITAP33076 SAGE4P-201ENST00000442271 3381 ntBASIC4.48□□□□□ -1.69
CIITAP33076 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CIITAP33076 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CIITAP33076 SUGT1P1-201ENST00000379514 476 ntBASIC4.48□□□□□ -1.69
CIITAP33076 RNU6-1279P-201ENST00000383917 103 ntBASIC4.48□□□□□ -1.69
CIITAP33076 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.48□□□□□ -1.69
CIITAP33076 RPL23AP48-201ENST00000406913 488 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AL139098.1-201ENST00000407291 389 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AL450992.3-201ENST00000413192 568 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 AC244035.1-201ENST00000430042 390 ntBASIC4.48□□□□□ -1.69
CIITAP33076 DLGAP5P1-201ENST00000430307 464 ntBASIC4.48□□□□□ -1.69
CIITAP33076 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.48□□□□□ -1.69
CIITAP33076 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 AC009961.3-201ENST00000449832 765 ntBASIC4.48□□□□□ -1.69
CIITAP33076 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.48□□□□□ -1.69
CIITAP33076 RPL31P61-201ENST00000496160 376 ntBASIC4.48□□□□□ -1.69
CIITAP33076 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 LTV1P1-201ENST00000510683 1237 ntBASIC4.48□□□□□ -1.69
CIITAP33076 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 RNA5SP154-201ENST00000516193 111 ntBASIC4.48□□□□□ -1.69
CIITAP33076 RPL12P22-201ENST00000519073 490 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 HIGD1AP6-201ENST00000521833 279 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.48□□□□□ -1.69
CIITAP33076 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 DEFB109D-201ENST00000529497 240 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.48□□□□□ -1.69
CIITAP33076 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CIITAP33076 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
CIITAP33076 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.48□□□□□ -1.69
CIITAP33076 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 AC017100.2-201ENST00000584628 355 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.48□□□□□ -1.69
CIITAP33076 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.48□□□□□ -1.69
CIITAP33076 AL390838.2-201ENST00000602394 274 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AL606490.9-201ENST00000603331 271 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AC008638.3-201ENST00000603341 463 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AC064872.1-201ENST00000604823 1072 ntBASIC4.48□□□□□ -1.69
CIITAP33076 OR6R2P-201ENST00000609216 300 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AL359535.1-201ENST00000612100 1087 ntBASIC4.48□□□□□ -1.69
CIITAP33076 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.48□□□□□ -1.69
CIITAP33076 AC069209.1-201ENST00000619282 651 ntBASIC4.48□□□□□ -1.69
CIITAP33076 DDX43P2-201ENST00000604753 1354 ntBASIC4.48□□□□□ -1.69
CIITAP33076 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.48□□□□□ -1.69
CIITAP33076 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CIITAP33076 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.48□□□□□ -1.69
CIITAP33076 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CIITAP33076 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CIITAP33076 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CIITAP33076 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.47□□□□□ -1.69
CIITAP33076 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CIITAP33076 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CIITAP33076 RNU6-1151P-201ENST00000384684 107 ntBASIC4.47□□□□□ -1.69
CIITAP33076 RPL7AP73-201ENST00000413490 353 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.47□□□□□ -1.69
CIITAP33076 NPM1P11-201ENST00000417106 855 ntBASIC4.47□□□□□ -1.69
CIITAP33076 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.47□□□□□ -1.69
CIITAP33076 AC009237.2-201ENST00000421358 284 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.47□□□□□ -1.69
CIITAP33076 RWDD4P2-201ENST00000426392 563 ntBASIC4.47□□□□□ -1.69
CIITAP33076 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CIITAP33076 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
CIITAP33076 AC129850.1-201ENST00000436203 508 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.47□□□□□ -1.69
CIITAP33076 AC004865.1-201ENST00000442276 1003 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.47□□□□□ -1.69
CIITAP33076 MTCO3P16-201ENST00000454456 754 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.47□□□□□ -1.69
CIITAP33076 RPS6P4-201ENST00000494693 758 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.47□□□□□ -1.69
CIITAP33076 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms