Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLIP1P30622 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLIP1P30622 RNA5SP210-201ENST00000391034 120 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 SNORA79B-201ENST00000410557 148 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 RPS20P25-201ENST00000412447 352 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.04□□□□□ -1.76
CLIP1P30622 RPL9P33-201ENST00000484311 566 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 AC068305.1-201ENST00000497406 726 ntBASIC4.04□□□□□ -1.76
CLIP1P30622 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.04□□□□□ -1.76
CLIP1P30622 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
CLIP1P30622 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.04□□□□□ -1.76
CLIP1P30622 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CLIP1P30622 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLIP1P30622 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLIP1P30622 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLIP1P30622 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLIP1P30622 RNA5SP289-201ENST00000362332 137 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 MTCO3P31-201ENST00000405526 789 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 RPS4XP7-201ENST00000406274 780 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLIP1P30622 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP1P30622 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.03□□□□□ -1.76
CLIP1P30622 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.03□□□□□ -1.76
CLIP1P30622 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLIP1P30622 AC133134.1-201ENST00000466800 359 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 AP000893.1-201ENST00000474462 794 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 RPL23AP11-201ENST00000475260 469 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 POU5F1P7-201ENST00000508759 541 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 RPS27AP18-201ENST00000515536 459 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP1P30622 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP1P30622 CBX3P5-201ENST00000552017 521 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 AC006116.7-201ENST00000590141 756 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 DNAJC19P3-201ENST00000594491 331 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 CRYM-AS1-204ENST00000637983 556 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 AL450326.2-201ENST00000421913 1962 ntBASIC4.03□□□□□ -1.76
CLIP1P30622 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CLIP1P30622 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CLIP1P30622 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP1P30622 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.02□□□□□ -1.77
CLIP1P30622 USP9YP20-201ENST00000419224 558 ntBASIC4.02□□□□□ -1.77
CLIP1P30622 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP1P30622 AL606490.7-201ENST00000433136 191 ntBASIC4.02□□□□□ -1.77
CLIP1P30622 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.02□□□□□ -1.77
CLIP1P30622 ST13P20-201ENST00000447996 1065 ntBASIC4.02□□□□□ -1.77
CLIP1P30622 AC008280.2-201ENST00000455473 307 ntBASIC4.02□□□□□ -1.77
CLIP1P30622 RPS20P32-201ENST00000456044 356 ntBASIC4.02□□□□□ -1.77
CLIP1P30622 UBL5P3-201ENST00000475112 231 ntBASIC4.02□□□□□ -1.77
CLIP1P30622 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP1P30622 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP1P30622 AC022069.1-201ENST00000582910 658 ntBASIC4.02□□□□□ -1.77
CLIP1P30622 MIR6715B-201ENST00000637172 77 ntBASIC4.02□□□□□ -1.77
CLIP1P30622 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP1P30622 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CLIP1P30622 SNORA36C-201ENST00000384289 132 ntBASIC4.01□□□□□ -1.77
CLIP1P30622 MIR592-201ENST00000384959 97 ntBASIC4.01□□□□□ -1.77
CLIP1P30622 RPL7P10-201ENST00000417407 739 ntBASIC4.01□□□□□ -1.77
CLIP1P30622 RPL36AP33-201ENST00000450395 310 ntBASIC4.01□□□□□ -1.77
CLIP1P30622 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP1P30622 AP003499.2-201ENST00000624100 483 ntBASIC4.01□□□□□ -1.77
CLIP1P30622 AC092079.1-201ENST00000558620 1985 ntBASIC4□□□□□ -1.77
CLIP1P30622 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4□□□□□ -1.77
CLIP1P30622 PNPT1P2-201ENST00000456768 2050 ntBASIC4□□□□□ -1.77
CLIP1P30622 SNORD88.1-201ENST00000408684 91 ntBASIC4□□□□□ -1.77
CLIP1P30622 AC234781.4-201ENST00000419384 244 ntBASIC4□□□□□ -1.77
CLIP1P30622 AC010095.1-201ENST00000443543 144 ntBASIC4□□□□□ -1.77
CLIP1P30622 AC126182.1-201ENST00000478134 357 ntBASIC4□□□□□ -1.77
CLIP1P30622 CKS1BP7-201ENST00000522230 235 ntBASIC4□□□□□ -1.77
CLIP1P30622 AC025260.1-201ENST00000548858 430 ntBASIC4□□□□□ -1.77
CLIP1P30622 AL845331.3-202ENST00000562856 261 ntBASIC4□□□□□ -1.77
CLIP1P30622 AC103810.6-201ENST00000606708 136 ntBASIC4□□□□□ -1.77
CLIP1P30622 AC016717.2-201ENST00000609089 5141 ntBASIC4□□□□□ -1.77
CLIP1P30622 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4□□□□□ -1.77
CLIP1P30622 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLIP1P30622 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
CLIP1P30622 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLIP1P30622 MAPK10-362ENST00000641864 4484 ntBASIC3.99□□□□□ -1.77
CLIP1P30622 AC093775.1-201ENST00000624154 1868 ntBASIC3.99□□□□□ -1.77
CLIP1P30622 U8.2-201ENST00000363156 134 ntBASIC3.99□□□□□ -1.77
CLIP1P30622 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.99□□□□□ -1.77
CLIP1P30622 SDCBPP3-201ENST00000419629 891 ntBASIC3.99□□□□□ -1.77
CLIP1P30622 AC012498.1-201ENST00000424037 437 ntBASIC3.99□□□□□ -1.77
CLIP1P30622 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.99□□□□□ -1.77
CLIP1P30622 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLIP1P30622 OR7K1P-201ENST00000546439 926 ntBASIC3.99□□□□□ -1.77
CLIP1P30622 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.99□□□□□ -1.77
CLIP1P30622 RN7SKP44-201ENST00000363602 316 ntBASIC3.98□□□□□ -1.77
CLIP1P30622 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLIP1P30622 RPL36AP51-201ENST00000487216 318 ntBASIC3.98□□□□□ -1.77
CLIP1P30622 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP1P30622 AC093331.1-201ENST00000521474 169 ntBASIC3.98□□□□□ -1.77
CLIP1P30622 TRAV37-201ENST00000553906 342 ntBASIC3.98□□□□□ -1.77
CLIP1P30622 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP1P30622 U4.3-201ENST00000621047 82 ntBASIC3.98□□□□□ -1.77
CLIP1P30622 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.98□□□□□ -1.77
CLIP1P30622 MIR365B-201ENST00000362317 111 ntBASIC3.97□□□□□ -1.77
CLIP1P30622 RNVU1-3-201ENST00000364313 161 ntBASIC3.97□□□□□ -1.77
CLIP1P30622 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP1P30622 AL359511.1-201ENST00000402970 211 ntBASIC3.97□□□□□ -1.77
CLIP1P30622 AL034379.1-201ENST00000423216 253 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms