Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 MTND1P22-201ENST00000510572 951 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC116353.3-201ENST00000511215 249 ntBASIC3.47□□□□□ -1.85
SHC1P29353 NPM1P41-201ENST00000512920 831 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC093755.1-201ENST00000512950 1023 ntBASIC3.47□□□□□ -1.85
SHC1P29353 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 Y_RNA.655-201ENST00000515919 96 ntBASIC3.47□□□□□ -1.85
SHC1P29353 RNA5SP208-201ENST00000516156 78 ntBASIC3.47□□□□□ -1.85
SHC1P29353 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.47□□□□□ -1.85
SHC1P29353 HMGB1P23-201ENST00000518743 568 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 AC022695.1-201ENST00000522089 237 ntBASIC3.47□□□□□ -1.85
SHC1P29353 IGJP1-201ENST00000522682 475 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 OR4C2P-201ENST00000530855 1064 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 POLR2KP1-201ENST00000553226 168 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 BNIP3P5-201ENST00000562290 498 ntBASIC3.47□□□□□ -1.85
SHC1P29353 MIR4666A-201ENST00000580160 79 ntBASIC3.47□□□□□ -1.85
SHC1P29353 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.47□□□□□ -1.85
SHC1P29353 AL020997.2-201ENST00000602607 184 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AL031281.1-201ENST00000604049 488 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC010680.3-201ENST00000604215 520 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC122108.2-201ENST00000611946 526 ntBASIC3.47□□□□□ -1.85
SHC1P29353 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.47□□□□□ -1.85
SHC1P29353 AC022509.4-201ENST00000621404 572 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC079684.1-201ENST00000621405 437 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC079248.2-201ENST00000623779 326 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC098679.4-201ENST00000624241 654 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC091905.1-201ENST00000624400 311 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC092608.3-201ENST00000625017 386 ntBASIC3.47□□□□□ -1.85
SHC1P29353 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
SHC1P29353 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.47□□□□□ -1.85
SHC1P29353 DCAF13P3-201ENST00000561147 1334 ntBASIC3.46□□□□□ -1.85
SHC1P29353 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SHC1P29353 AP000776.1-201ENST00000530032 1663 ntBASIC3.46□□□□□ -1.85
SHC1P29353 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHC1P29353 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.46□□□□□ -1.86
SHC1P29353 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SHC1P29353 ELL2P3-201ENST00000457883 1602 ntBASIC3.46□□□□□ -1.86
SHC1P29353 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHC1P29353 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHC1P29353 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHC1P29353 MIR199A2-201ENST00000385289 110 ntBASIC3.46□□□□□ -1.86
SHC1P29353 SOD2P1-201ENST00000396543 562 ntBASIC3.46□□□□□ -1.86
SHC1P29353 SNORA11C-201ENST00000408532 129 ntBASIC3.46□□□□□ -1.86
SHC1P29353 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.46□□□□□ -1.86
SHC1P29353 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.46□□□□□ -1.86
SHC1P29353 AC114814.2-201ENST00000419195 485 ntBASIC3.46□□□□□ -1.86
SHC1P29353 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 RPP40P1-201ENST00000426762 456 ntBASIC3.46□□□□□ -1.86
SHC1P29353 OR4F13P-201ENST00000428478 931 ntBASIC3.46□□□□□ -1.86
SHC1P29353 ATP5F1P1-201ENST00000433775 569 ntBASIC3.46□□□□□ -1.86
SHC1P29353 BMS1P19-201ENST00000433925 393 ntBASIC3.46□□□□□ -1.86
SHC1P29353 SKP1P1-201ENST00000438081 489 ntBASIC3.46□□□□□ -1.86
SHC1P29353 ISCA1P2-201ENST00000438679 421 ntBASIC3.46□□□□□ -1.86
SHC1P29353 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.46□□□□□ -1.86
SHC1P29353 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 AL606662.1-201ENST00000445763 553 ntBASIC3.46□□□□□ -1.86
SHC1P29353 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SHC1P29353 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.46□□□□□ -1.86
SHC1P29353 TRBV8-2-201ENST00000475637 270 ntBASIC3.46□□□□□ -1.86
SHC1P29353 AC104687.1-201ENST00000485829 412 ntBASIC3.46□□□□□ -1.86
SHC1P29353 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 FTH1P24-201ENST00000503502 462 ntBASIC3.46□□□□□ -1.86
SHC1P29353 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 RAC1P2-201ENST00000511164 579 ntBASIC3.46□□□□□ -1.86
SHC1P29353 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.46□□□□□ -1.86
SHC1P29353 RNU6-232P-201ENST00000517144 64 ntBASIC3.46□□□□□ -1.86
SHC1P29353 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 IGKV2-36-201ENST00000519999 223 ntBASIC3.46□□□□□ -1.86
SHC1P29353 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHC1P29353 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.46□□□□□ -1.86
SHC1P29353 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.46□□□□□ -1.86
SHC1P29353 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.46□□□□□ -1.86
SHC1P29353 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.46□□□□□ -1.86
SHC1P29353 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 HIGD1AP17-201ENST00000554576 276 ntBASIC3.46□□□□□ -1.86
SHC1P29353 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.46□□□□□ -1.86
SHC1P29353 HSPE1P5-201ENST00000561489 272 ntBASIC3.46□□□□□ -1.86
SHC1P29353 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.46□□□□□ -1.86
SHC1P29353 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.46□□□□□ -1.86
SHC1P29353 AC087499.8-201ENST00000578406 226 ntBASIC3.46□□□□□ -1.86
SHC1P29353 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.46□□□□□ -1.86
SHC1P29353 AC022069.1-201ENST00000582910 658 ntBASIC3.46□□□□□ -1.86
SHC1P29353 NBR2-204ENST00000587322 63 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms