Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL8A2P25067 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL8A2P25067 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL8A2P25067 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COL8A2P25067 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL8A2P25067 AL512283.1-201ENST00000606756 1384 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL8A2P25067 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL8A2P25067 AC021755.1-201ENST00000559747 1447 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 RPL7P26-201ENST00000333817 754 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
COL8A2P25067 MIR148B-201ENST00000362252 99 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL8A2P25067 UBA52P6-201ENST00000399822 382 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 SNORA11C-201ENST00000408532 129 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 RNU2-37P-201ENST00000410695 177 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.63□□□□□ -1.99
COL8A2P25067 AC234782.4-201ENST00000417646 1048 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.63□□□□□ -1.99
COL8A2P25067 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.63□□□□□ -1.99
COL8A2P25067 HMGN1P18-201ENST00000457642 277 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AP001486.1-201ENST00000463339 476 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.63□□□□□ -1.99
COL8A2P25067 MTCO1P30-201ENST00000515244 580 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AC009812.2-201ENST00000517657 457 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AP003049.1-201ENST00000529418 457 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 PTP4A1P6-201ENST00000531034 478 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL8A2P25067 AC022080.3-201ENST00000544433 482 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 CR383656.14-201ENST00000551951 406 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.63□□□□□ -1.99
COL8A2P25067 ZNF192P1-203ENST00000565888 810 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AC233266.2-201ENST00000567067 528 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AC106782.4-201ENST00000568264 210 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.63□□□□□ -1.99
COL8A2P25067 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.63□□□□□ -1.99
COL8A2P25067 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.63□□□□□ -1.99
COL8A2P25067 AP003117.2-201ENST00000606010 545 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AC004775.1-201ENST00000607389 753 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 U6.48-201ENST00000618523 106 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.63□□□□□ -1.99
COL8A2P25067 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL8A2P25067 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL8A2P25067 AL592494.2-201ENST00000425455 1548 ntBASIC2.63□□□□□ -1.99
COL8A2P25067 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.63□□□□□ -1.99
COL8A2P25067 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
COL8A2P25067 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL8A2P25067 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.62□□□□□ -1.99
COL8A2P25067 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL8A2P25067 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COL8A2P25067 GTF2H2B-203ENST00000508065 1432 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 RNA5SP391-201ENST00000363456 119 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 SNORA71.1-201ENST00000364523 117 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 RNU4-31P-201ENST00000384211 141 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 SNORD67-201ENST00000390833 111 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC110754.1-201ENST00000399740 601 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AL590290.1-201ENST00000405336 380 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 HMGB1P13-201ENST00000406019 642 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AL353692.2-201ENST00000407054 335 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC010385.1-201ENST00000412374 256 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 ELOCP6-201ENST00000429066 328 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.62□□□□□ -1.99
COL8A2P25067 SETP5-201ENST00000437270 562 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.62□□□□□ -1.99
COL8A2P25067 MTND2P6-201ENST00000455337 1030 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 RPS20P32-201ENST00000456044 356 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.62□□□□□ -1.99
COL8A2P25067 ELOCP12-201ENST00000458706 328 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC108729.2-201ENST00000476543 840 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL8A2P25067 AC010468.3-201ENST00000508225 458 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.62□□□□□ -1.99
COL8A2P25067 AC113192.3-201ENST00000529152 742 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.62□□□□□ -1.99
COL8A2P25067 AP002404.1-201ENST00000532005 451 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AP002812.4-201ENST00000532139 286 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.62□□□□□ -1.99
COL8A2P25067 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.62□□□□□ -1.99
COL8A2P25067 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.62□□□□□ -1.99
COL8A2P25067 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.62□□□□□ -1.99
COL8A2P25067 MIR3908-201ENST00000579798 126 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.62□□□□□ -1.99
COL8A2P25067 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.62□□□□□ -1.99
COL8A2P25067 AC006539.2-201ENST00000601729 572 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC106730.3-201ENST00000624568 641 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC097372.4-201ENST00000625025 466 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC138649.5-201ENST00000637456 137 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.62□□□□□ -1.99
COL8A2P25067 MIR622-201ENST00000638396 96 ntBASIC2.62□□□□□ -1.99
COL8A2P25067 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
COL8A2P25067 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.62□□□□□ -1.99
COL8A2P25067 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.61□□□□□ -1.99
COL8A2P25067 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
COL8A2P25067 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.61□□□□□ -1.99
COL8A2P25067 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.61□□□□□ -1.99
COL8A2P25067 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL8A2P25067 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL8A2P25067 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
COL8A2P25067 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms