Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL356967.1-201ENST00000406305 431 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC069218.2-201ENST00000411665 344 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 COX6CP15-201ENST00000426313 211 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC068287.1-201ENST00000430283 295 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 HSPE1P28-201ENST00000443139 211 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC012512.1-201ENST00000446594 718 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AP001025.2-201ENST00000490908 477 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 OR5B19P-201ENST00000531766 928 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC055876.1-202ENST00000567053 138 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC110743.1-201ENST00000584870 478 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AL355598.1-201ENST00000604169 202 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC104687.2-201ENST00000604442 342 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 MIR6780A-201ENST00000615089 68 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 MIR6758-201ENST00000620653 63 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AL078596.1-201ENST00000624856 447 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC138649.5-201ENST00000637456 137 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC092070.2-203ENST00000598377 3644 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AC083837.1-201ENST00000565297 2994 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 CKAP2P1-201ENST00000555477 2049 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 MTND5P28-201ENST00000438005 1594 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AL049780.3-201ENST00000624612 1583 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AC092681.1-201ENST00000297369 291 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 RNA5SP191-201ENST00000362585 102 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 Y_RNA.202-201ENST00000364083 110 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-331P-201ENST00000384724 107 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-1105P-201ENST00000384774 107 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AC068050.1-201ENST00000394891 380 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 RPL32P23-201ENST00000397237 405 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AL162578.1-201ENST00000406202 378 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 SNORA11-201ENST00000408789 128 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 RPL7P57-201ENST00000423238 740 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AL161722.2-201ENST00000434731 981 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AC239809.1-201ENST00000450470 217 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 SNORD19B-201ENST00000459623 84 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 RPS3AP50-201ENST00000487064 803 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AC006427.1-201ENST00000514359 712 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-264P-201ENST00000517134 104 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AC068790.5-201ENST00000602741 355 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AC000123.2-201ENST00000623124 461 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 AP006248.2-201ENST00000623309 592 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 CYP3A51P-201ENST00000633513 256 ntBASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.84□□□□□ -1.31
CSB-PGBD3P0DP91 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.84□□□□□ -1.32
CSB-PGBD3P0DP91 MFSD8-216ENST00000641147 4009 ntBASIC6.84□□□□□ -1.32
CSB-PGBD3P0DP91 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
CSB-PGBD3P0DP91 GVINP1-202ENST00000531871 7271 ntBASIC6.84□□□□□ -1.32
CSB-PGBD3P0DP91 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CSB-PGBD3P0DP91 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.83□□□□□ -1.32
CSB-PGBD3P0DP91 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CSB-PGBD3P0DP91 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.83□□□□□ -1.32
CSB-PGBD3P0DP91 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CSB-PGBD3P0DP91 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms