Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.43□□□□□ -1.86
TPM1P09493 AL627309.6-201ENST00000606857 840 ntBASIC3.43□□□□□ -1.86
TPM1P09493 VIS1.1-201ENST00000610517 203 ntBASIC3.43□□□□□ -1.86
TPM1P09493 AL121772.2-201ENST00000614331 297 ntBASIC3.43□□□□□ -1.86
TPM1P09493 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.43□□□□□ -1.86
TPM1P09493 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.43□□□□□ -1.86
TPM1P09493 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TPM1P09493 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.43□□□□□ -1.86
TPM1P09493 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
TPM1P09493 AC016716.1-201ENST00000265882 708 ntBASIC3.42□□□□□ -1.86
TPM1P09493 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TPM1P09493 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
TPM1P09493 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TPM1P09493 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.42□□□□□ -1.86
TPM1P09493 SNORD88.1-201ENST00000408684 91 ntBASIC3.42□□□□□ -1.86
TPM1P09493 HMGN1P24-201ENST00000412282 298 ntBASIC3.42□□□□□ -1.86
TPM1P09493 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.42□□□□□ -1.86
TPM1P09493 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.42□□□□□ -1.86
TPM1P09493 AL445584.1-201ENST00000431451 330 ntBASIC3.42□□□□□ -1.86
TPM1P09493 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM1P09493 RPL26P28-201ENST00000451325 435 ntBASIC3.42□□□□□ -1.86
TPM1P09493 NUTF2P7-201ENST00000453086 375 ntBASIC3.42□□□□□ -1.86
TPM1P09493 AC087879.1-201ENST00000474343 374 ntBASIC3.42□□□□□ -1.86
TPM1P09493 RN7SL499P-201ENST00000481141 276 ntBASIC3.42□□□□□ -1.86
TPM1P09493 AC068724.1-201ENST00000487100 792 ntBASIC3.42□□□□□ -1.86
TPM1P09493 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM1P09493 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM1P09493 AC008885.2-201ENST00000509506 930 ntBASIC3.42□□□□□ -1.86
TPM1P09493 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.42□□□□□ -1.86
TPM1P09493 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.42□□□□□ -1.86
TPM1P09493 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM1P09493 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.42□□□□□ -1.86
TPM1P09493 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM1P09493 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.42□□□□□ -1.86
TPM1P09493 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM1P09493 AC018618.2-201ENST00000604770 446 ntBASIC3.42□□□□□ -1.86
TPM1P09493 AL110115.1-201ENST00000614396 364 ntBASIC3.42□□□□□ -1.86
TPM1P09493 AC068831.7-201ENST00000616954 363 ntBASIC3.42□□□□□ -1.86
TPM1P09493 AL590240.3-201ENST00000621416 943 ntBASIC3.42□□□□□ -1.86
TPM1P09493 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
TPM1P09493 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TPM1P09493 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TPM1P09493 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TPM1P09493 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TPM1P09493 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TPM1P09493 AC110754.1-201ENST00000399740 601 ntBASIC3.41□□□□□ -1.86
TPM1P09493 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TPM1P09493 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.41□□□□□ -1.86
TPM1P09493 YPEL5P1-201ENST00000419731 367 ntBASIC3.41□□□□□ -1.86
TPM1P09493 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.41□□□□□ -1.86
TPM1P09493 AL445528.1-201ENST00000426330 420 ntBASIC3.41□□□□□ -1.86
TPM1P09493 AC108734.1-201ENST00000439549 399 ntBASIC3.41□□□□□ -1.86
TPM1P09493 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.41□□□□□ -1.86
TPM1P09493 AP004217.1-201ENST00000480579 346 ntBASIC3.41□□□□□ -1.86
TPM1P09493 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.41□□□□□ -1.86
TPM1P09493 RPL21P13-201ENST00000488305 481 ntBASIC3.41□□□□□ -1.86
TPM1P09493 RN7SL633P-201ENST00000488974 297 ntBASIC3.41□□□□□ -1.86
TPM1P09493 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.41□□□□□ -1.86
TPM1P09493 RPL7P23-201ENST00000493874 747 ntBASIC3.41□□□□□ -1.86
TPM1P09493 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.41□□□□□ -1.86
TPM1P09493 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TPM1P09493 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.41□□□□□ -1.86
TPM1P09493 OR5B10P-201ENST00000532869 642 ntBASIC3.41□□□□□ -1.86
TPM1P09493 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.41□□□□□ -1.86
TPM1P09493 CR383656.14-201ENST00000551951 406 ntBASIC3.41□□□□□ -1.86
TPM1P09493 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.41□□□□□ -1.86
TPM1P09493 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.41□□□□□ -1.86
TPM1P09493 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.41□□□□□ -1.86
TPM1P09493 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
TPM1P09493 SNORD84-203ENST00000584275 78 ntBASIC3.41□□□□□ -1.86
TPM1P09493 AC103881.1-201ENST00000603476 538 ntBASIC3.41□□□□□ -1.86
TPM1P09493 AC015849.2-201ENST00000605738 409 ntBASIC3.41□□□□□ -1.86
TPM1P09493 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TPM1P09493 AL034408.1-202ENST00000636088 415 ntBASIC3.41□□□□□ -1.86
TPM1P09493 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.41□□□□□ -1.86
TPM1P09493 MAPK10-322ENST00000641485 4530 ntBASIC3.41□□□□□ -1.86
TPM1P09493 AC103988.1-201ENST00000566382 2177 ntBASIC3.41□□□□□ -1.86
TPM1P09493 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
TPM1P09493 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TPM1P09493 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.4□□□□□ -1.86
TPM1P09493 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.4□□□□□ -1.87
TPM1P09493 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TPM1P09493 RNA5SP50-201ENST00000363731 107 ntBASIC3.4□□□□□ -1.87
TPM1P09493 RNU6-374P-201ENST00000364146 108 ntBASIC3.4□□□□□ -1.87
TPM1P09493 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TPM1P09493 AC234772.1-201ENST00000377927 937 ntBASIC3.4□□□□□ -1.87
TPM1P09493 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.4□□□□□ -1.87
TPM1P09493 BX323014.1-201ENST00000412876 237 ntBASIC3.4□□□□□ -1.87
TPM1P09493 HSFY4P-201ENST00000415994 1181 ntBASIC3.4□□□□□ -1.87
TPM1P09493 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.4□□□□□ -1.87
TPM1P09493 OR1AA1P-201ENST00000419597 916 ntBASIC3.4□□□□□ -1.87
TPM1P09493 MTCO1P57-201ENST00000432182 261 ntBASIC3.4□□□□□ -1.87
TPM1P09493 AC140076.1-201ENST00000449897 361 ntBASIC3.4□□□□□ -1.87
TPM1P09493 AC093392.2-201ENST00000450682 337 ntBASIC3.4□□□□□ -1.87
TPM1P09493 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.4□□□□□ -1.87
TPM1P09493 HMGB1P25-201ENST00000468402 607 ntBASIC3.4□□□□□ -1.87
TPM1P09493 AC010301.1-201ENST00000473936 355 ntBASIC3.4□□□□□ -1.87
TPM1P09493 RNF138P1-201ENST00000502765 546 ntBASIC3.4□□□□□ -1.87
TPM1P09493 AC021678.1-201ENST00000505195 936 ntBASIC3.4□□□□□ -1.87
TPM1P09493 AC133963.2-201ENST00000513686 578 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms