Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC1.59□□□□□ -2.16
APOBP04114 OR6K1P-201ENST00000456766 971 ntBASIC1.59□□□□□ -2.16
APOBP04114 RNA5SP281-201ENST00000516504 135 ntBASIC1.59□□□□□ -2.16
APOBP04114 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
APOBP04114 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
APOBP04114 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC1.59□□□□□ -2.16
APOBP04114 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.59□□□□□ -2.16
APOBP04114 AL135786.1-201ENST00000415892 214 ntBASIC1.59□□□□□ -2.16
APOBP04114 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.59□□□□□ -2.16
APOBP04114 RPL31P45-201ENST00000419532 356 ntBASIC1.59□□□□□ -2.16
APOBP04114 AL049610.1-201ENST00000423374 372 ntBASIC1.59□□□□□ -2.16
APOBP04114 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.59□□□□□ -2.16
APOBP04114 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.59□□□□□ -2.16
APOBP04114 RPL23AP11-201ENST00000475260 469 ntBASIC1.59□□□□□ -2.16
APOBP04114 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
APOBP04114 VN1R9P-201ENST00000614184 867 ntBASIC1.59□□□□□ -2.16
APOBP04114 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
APOBP04114 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.58□□□□□ -2.16
APOBP04114 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.58□□□□□ -2.16
APOBP04114 AL121877.1-201ENST00000453704 622 ntBASIC1.58□□□□□ -2.16
APOBP04114 AP004217.1-201ENST00000480579 346 ntBASIC1.58□□□□□ -2.16
APOBP04114 KCTD9P5-201ENST00000504141 1170 ntBASIC1.58□□□□□ -2.16
APOBP04114 AC091917.2-201ENST00000505002 744 ntBASIC1.58□□□□□ -2.16
APOBP04114 OR8L1P-201ENST00000534005 955 ntBASIC1.58□□□□□ -2.16
APOBP04114 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.58□□□□□ -2.16
APOBP04114 ZNF861P-201ENST00000588126 639 ntBASIC1.58□□□□□ -2.16
APOBP04114 AC023813.4-201ENST00000607580 580 ntBASIC1.58□□□□□ -2.16
APOBP04114 AC067747.1-201ENST00000608026 250 ntBASIC1.58□□□□□ -2.16
APOBP04114 CRYM-AS1-204ENST00000637983 556 ntBASIC1.58□□□□□ -2.16
APOBP04114 AC093311.1-201ENST00000506586 2021 ntBASIC1.58□□□□□ -2.16
APOBP04114 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
APOBP04114 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 NPM1P10-201ENST00000398310 865 ntBASIC1.58□□□□□ -2.16
APOBP04114 RN7SKP32-201ENST00000410167 303 ntBASIC1.58□□□□□ -2.16
APOBP04114 RNU6-295P-201ENST00000516901 104 ntBASIC1.58□□□□□ -2.16
APOBP04114 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 AC010928.3-201ENST00000587712 541 ntBASIC1.58□□□□□ -2.16
APOBP04114 GCNT6-201ENST00000379591 934 ntBASIC1.58□□□□□ -2.16
APOBP04114 AC006960.1-201ENST00000419980 153 ntBASIC1.58□□□□□ -2.16
APOBP04114 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC1.58□□□□□ -2.16
APOBP04114 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC1.58□□□□□ -2.16
APOBP04114 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.58□□□□□ -2.16
APOBP04114 RPL36AP51-201ENST00000487216 318 ntBASIC1.58□□□□□ -2.16
APOBP04114 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.58□□□□□ -2.16
APOBP04114 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 RN7SKP24-201ENST00000515888 284 ntBASIC1.58□□□□□ -2.16
APOBP04114 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.58□□□□□ -2.16
APOBP04114 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.58□□□□□ -2.16
APOBP04114 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
APOBP04114 AL359821.1-201ENST00000605519 182 ntBASIC1.58□□□□□ -2.16
APOBP04114 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC1.58□□□□□ -2.16
APOBP04114 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC1.58□□□□□ -2.16
APOBP04114 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.57□□□□□ -2.16
APOBP04114 AL450338.1-201ENST00000407987 512 ntBASIC1.57□□□□□ -2.16
APOBP04114 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.57□□□□□ -2.16
APOBP04114 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.57□□□□□ -2.16
APOBP04114 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.57□□□□□ -2.16
APOBP04114 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.57□□□□□ -2.16
APOBP04114 AC007621.1-201ENST00000604544 437 ntBASIC1.57□□□□□ -2.16
APOBP04114 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
APOBP04114 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 RPLP0P7-201ENST00000416050 667 ntBASIC1.57□□□□□ -2.16
APOBP04114 RPL30P9-201ENST00000465586 330 ntBASIC1.57□□□□□ -2.16
APOBP04114 AC068587.2-201ENST00000478386 781 ntBASIC1.57□□□□□ -2.16
APOBP04114 AC108860.1-201ENST00000484521 383 ntBASIC1.57□□□□□ -2.16
APOBP04114 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.57□□□□□ -2.16
APOBP04114 MIR2114-201ENST00000516645 80 ntBASIC1.57□□□□□ -2.16
APOBP04114 AC023043.2-201ENST00000589678 1026 ntBASIC1.57□□□□□ -2.16
APOBP04114 AC104237.2-201ENST00000612456 443 ntBASIC1.57□□□□□ -2.16
APOBP04114 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.57□□□□□ -2.16
APOBP04114 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 RNU6-1159P-201ENST00000362933 107 ntBASIC1.57□□□□□ -2.16
APOBP04114 RNU1-17P-201ENST00000363022 152 ntBASIC1.57□□□□□ -2.16
APOBP04114 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.57□□□□□ -2.16
APOBP04114 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC1.57□□□□□ -2.16
APOBP04114 AC003982.1-202ENST00000469928 248 ntBASIC1.57□□□□□ -2.16
APOBP04114 RPS29P11-201ENST00000496507 171 ntBASIC1.57□□□□□ -2.16
APOBP04114 OR5H3P-201ENST00000502817 919 ntBASIC1.57□□□□□ -2.16
APOBP04114 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.57□□□□□ -2.16
APOBP04114 AC069528.2-201ENST00000624849 1991 ntBASIC1.57□□□□□ -2.16
APOBP04114 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.57□□□□□ -2.16
APOBP04114 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 AC124916.1-201ENST00000444020 547 ntBASIC1.57□□□□□ -2.16
APOBP04114 AC007677.1-201ENST00000445757 515 ntBASIC1.57□□□□□ -2.16
APOBP04114 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.57□□□□□ -2.16
APOBP04114 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms