Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC007423.1-201ENST00000605009 627 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.01□□□□□ -1.93
COL4A1P02462 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 AL162233.1-201ENST00000620014 944 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A1P02462 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A1P02462 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A1P02462 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COL4A1P02462 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A1P02462 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.01□□□□□ -1.93
COL4A1P02462 AL590103.1-201ENST00000434488 307 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 Z99127.2-201ENST00000441426 334 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.01□□□□□ -1.93
COL4A1P02462 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.01□□□□□ -1.93
COL4A1P02462 RPL21P18-201ENST00000469899 480 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 AC011037.1-201ENST00000483964 558 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 RPL9P33-201ENST00000484311 566 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 OR4G11P-201ENST00000492842 939 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.01□□□□□ -1.93
COL4A1P02462 AC147055.1-201ENST00000509261 750 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 ACTR6P1-201ENST00000514311 1104 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.01□□□□□ -1.93
COL4A1P02462 AC009977.1-201ENST00000586015 570 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 AC092628.2-201ENST00000622492 339 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.01□□□□□ -1.93
COL4A1P02462 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL4A1P02462 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3□□□□□ -1.93
COL4A1P02462 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
COL4A1P02462 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3□□□□□ -1.93
COL4A1P02462 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL4A1P02462 RPS15AP6-201ENST00000420703 385 ntBASIC3□□□□□ -1.93
COL4A1P02462 AL356320.1-201ENST00000429616 163 ntBASIC3□□□□□ -1.93
COL4A1P02462 UBE2D3P1-201ENST00000436669 444 ntBASIC3□□□□□ -1.93
COL4A1P02462 AC018634.1-201ENST00000437554 401 ntBASIC3□□□□□ -1.93
COL4A1P02462 AL450263.2-201ENST00000439400 589 ntBASIC3□□□□□ -1.93
COL4A1P02462 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3□□□□□ -1.93
COL4A1P02462 HIGD1AP2-201ENST00000446367 280 ntBASIC3□□□□□ -1.93
COL4A1P02462 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL4A1P02462 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3□□□□□ -1.93
COL4A1P02462 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3□□□□□ -1.93
COL4A1P02462 AC110741.2-201ENST00000605278 268 ntBASIC3□□□□□ -1.93
COL4A1P02462 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3□□□□□ -1.93
COL4A1P02462 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
COL4A1P02462 CUL1P1-201ENST00000509510 2425 ntBASIC3□□□□□ -1.93
COL4A1P02462 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3□□□□□ -1.93
COL4A1P02462 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL4A1P02462 HSPD1P16-201ENST00000402302 394 ntBASIC2.99□□□□□ -1.93
COL4A1P02462 FAM103A2P-201ENST00000444122 354 ntBASIC2.99□□□□□ -1.93
COL4A1P02462 ST13P20-201ENST00000447996 1065 ntBASIC2.99□□□□□ -1.93
COL4A1P02462 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL4A1P02462 AF186190.1-201ENST00000517470 480 ntBASIC2.99□□□□□ -1.93
COL4A1P02462 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC2.99□□□□□ -1.93
COL4A1P02462 Z99129.2-201ENST00000619967 314 ntBASIC2.99□□□□□ -1.93
COL4A1P02462 U4.3-201ENST00000621047 82 ntBASIC2.99□□□□□ -1.93
COL4A1P02462 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.99□□□□□ -1.93
COL4A1P02462 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
COL4A1P02462 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.99□□□□□ -1.93
COL4A1P02462 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL4A1P02462 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.99□□□□□ -1.93
COL4A1P02462 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
COL4A1P02462 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
COL4A1P02462 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A1P02462 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A1P02462 TRGV5P-201ENST00000419915 354 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AL137014.1-201ENST00000420490 1226 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 MTND6P18-201ENST00000439477 513 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 WASF1P1-201ENST00000447560 1131 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.98□□□□□ -1.93
COL4A1P02462 VN1R17P-201ENST00000472048 1090 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A1P02462 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.98□□□□□ -1.93
COL4A1P02462 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.98□□□□□ -1.93
COL4A1P02462 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A1P02462 AL158827.2-201ENST00000602494 330 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AC007938.3-201ENST00000604965 623 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AL691447.3-201ENST00000635020 330 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A1P02462 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A1P02462 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL4A1P02462 Z73965.1-201ENST00000623412 2297 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
COL4A1P02462 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A1P02462 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A1P02462 RNU6-618P-201ENST00000363518 112 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AC019155.1-201ENST00000382242 574 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AL024474.1-201ENST00000404655 591 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 RPL23AP48-201ENST00000406913 488 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AC073136.2-201ENST00000417282 849 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 HMGN2P3-201ENST00000433603 273 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 HMGN2P5-201ENST00000436882 273 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.98□□□□□ -1.93
COL4A1P02462 RPL23AP45-201ENST00000476406 468 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 OR9N1P-201ENST00000491296 333 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A1P02462 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A1P02462 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A1P02462 AC055876.1-202ENST00000567053 138 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 RPL23AP84-201ENST00000571193 464 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A1P02462 AC078899.3-201ENST00000599065 212 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms