Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFP01375 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.71□□□□□ -1.98
TNFP01375 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFP01375 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFP01375 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFP01375 AC067852.4-201ENST00000590314 478 ntBASIC2.71□□□□□ -1.98
TNFP01375 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFP01375 AC008277.2-201ENST00000605196 797 ntBASIC2.71□□□□□ -1.98
TNFP01375 AL020991.1-201ENST00000612314 373 ntBASIC2.71□□□□□ -1.98
TNFP01375 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.71□□□□□ -1.98
TNFP01375 Z99129.2-201ENST00000619967 314 ntBASIC2.71□□□□□ -1.98
TNFP01375 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
TNFP01375 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.71□□□□□ -1.98
TNFP01375 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TNFP01375 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TNFP01375 RNU6-859P-201ENST00000362728 107 ntBASIC2.7□□□□□ -1.98
TNFP01375 AP000567.1-201ENST00000406413 156 ntBASIC2.7□□□□□ -1.98
TNFP01375 SSR1P1-201ENST00000407630 814 ntBASIC2.7□□□□□ -1.98
TNFP01375 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.7□□□□□ -1.98
TNFP01375 AC098592.2-201ENST00000413158 265 ntBASIC2.7□□□□□ -1.98
TNFP01375 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFP01375 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.7□□□□□ -1.98
TNFP01375 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFP01375 RPL7P59-201ENST00000447700 943 ntBASIC2.7□□□□□ -1.98
TNFP01375 RN7SL75P-201ENST00000461926 281 ntBASIC2.7□□□□□ -1.98
TNFP01375 RN7SL283P-201ENST00000489055 303 ntBASIC2.7□□□□□ -1.98
TNFP01375 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.7□□□□□ -1.98
TNFP01375 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFP01375 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFP01375 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFP01375 AC005951.1-201ENST00000576706 485 ntBASIC2.7□□□□□ -1.98
TNFP01375 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFP01375 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFP01375 GMCL1P2-201ENST00000605230 823 ntBASIC2.7□□□□□ -1.98
TNFP01375 AC243756.2-201ENST00000618406 463 ntBASIC2.7□□□□□ -1.98
TNFP01375 AL355493.4-201ENST00000618530 292 ntBASIC2.7□□□□□ -1.98
TNFP01375 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFP01375 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
TNFP01375 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.7□□□□□ -1.98
TNFP01375 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.69□□□□□ -1.98
TNFP01375 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TNFP01375 RPL9P7-201ENST00000330965 580 ntBASIC2.69□□□□□ -1.98
TNFP01375 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFP01375 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TNFP01375 DYNLT3P1-201ENST00000378574 347 ntBASIC2.69□□□□□ -1.98
TNFP01375 ARL5AP4-201ENST00000430731 512 ntBASIC2.69□□□□□ -1.98
TNFP01375 KC877373.1-201ENST00000479066 408 ntBASIC2.69□□□□□ -1.98
TNFP01375 MTND4LP22-201ENST00000508209 276 ntBASIC2.69□□□□□ -1.98
TNFP01375 POU5F1P7-201ENST00000508759 541 ntBASIC2.69□□□□□ -1.98
TNFP01375 AC006445.2-201ENST00000510061 472 ntBASIC2.69□□□□□ -1.98
TNFP01375 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFP01375 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFP01375 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFP01375 NRBF2P5-201ENST00000603087 788 ntBASIC2.69□□□□□ -1.98
TNFP01375 AC005156.1-201ENST00000613371 573 ntBASIC2.69□□□□□ -1.98
TNFP01375 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFP01375 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
TNFP01375 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TNFP01375 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFP01375 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFP01375 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TNFP01375 FTLP6-201ENST00000355274 422 ntBASIC2.68□□□□□ -1.98
TNFP01375 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TNFP01375 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
TNFP01375 RPS4XP8-201ENST00000402039 771 ntBASIC2.68□□□□□ -1.98
TNFP01375 AL031121.1-201ENST00000406553 254 ntBASIC2.68□□□□□ -1.98
TNFP01375 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFP01375 AC048351.1-201ENST00000420064 602 ntBASIC2.68□□□□□ -1.98
TNFP01375 AC009965.2-201ENST00000425328 970 ntBASIC2.68□□□□□ -1.98
TNFP01375 ELOCP6-201ENST00000429066 328 ntBASIC2.68□□□□□ -1.98
TNFP01375 AC007563.3-201ENST00000433233 371 ntBASIC2.68□□□□□ -1.98
TNFP01375 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFP01375 AP000936.2-201ENST00000447151 681 ntBASIC2.68□□□□□ -1.98
TNFP01375 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFP01375 ELOCP12-201ENST00000458706 328 ntBASIC2.68□□□□□ -1.98
TNFP01375 RPL21P8-201ENST00000465083 535 ntBASIC2.68□□□□□ -1.98
TNFP01375 RPL7P5-201ENST00000471472 736 ntBASIC2.68□□□□□ -1.98
TNFP01375 AC096725.1-201ENST00000514266 313 ntBASIC2.68□□□□□ -1.98
TNFP01375 MIR4506-201ENST00000584693 77 ntBASIC2.68□□□□□ -1.98
TNFP01375 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFP01375 AC092608.2-201ENST00000624427 218 ntBASIC2.68□□□□□ -1.98
TNFP01375 AC008264.2-201ENST00000610193 3731 ntBASIC2.68□□□□□ -1.98
TNFP01375 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFP01375 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFP01375 MAPK10-362ENST00000641864 4484 ntBASIC2.68□□□□□ -1.98
TNFP01375 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFP01375 MIR449A-201ENST00000362113 91 ntBASIC2.67□□□□□ -1.98
TNFP01375 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFP01375 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.67□□□□□ -1.98
TNFP01375 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFP01375 RPL31P45-201ENST00000419532 356 ntBASIC2.67□□□□□ -1.98
TNFP01375 SDCBPP3-201ENST00000419629 891 ntBASIC2.67□□□□□ -1.98
TNFP01375 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.67□□□□□ -1.98
TNFP01375 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFP01375 DPPA2P1-201ENST00000428060 556 ntBASIC2.67□□□□□ -1.98
TNFP01375 OR2B8P-201ENST00000432841 938 ntBASIC2.67□□□□□ -1.98
TNFP01375 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFP01375 HMGN2P21-201ENST00000447764 270 ntBASIC2.67□□□□□ -1.98
TNFP01375 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFP01375 AC091179.1-201ENST00000461606 579 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms